Human Gene CATSPERE (ENST00000366533.8) from GENCODE V38
  Description: Homo sapiens catsper channel auxiliary subunit epsilon (CATSPERE), transcript variant 2, mRNA. (from RefSeq NM_173807)
Gencode Transcript: ENST00000366533.8
Gencode Gene: ENSG00000179397.18
Transcript (Including UTRs)
   Position: hg38 chr1:244,461,388-244,640,360 Size: 178,973 Total Exon Count: 21 Strand: +
Coding Region
   Position: hg38 chr1:244,461,430-244,635,497 Size: 174,068 Coding Exon Count: 20 

Page IndexSequence and LinksUniProtKB CommentsRNA-Seq ExpressionMicroarray ExpressionRNA Structure
Protein StructureOther SpeciesGO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2021-09-27 09:51:20

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr1:244,461,388-244,640,360)mRNA (may differ from genome)Protein (832 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerGeneCardsHPRDLynxMGI

-  Comments and Description Text from UniProtKB
DESCRIPTION: RecName: Full=Uncharacterized protein C1orf101; Flags: Precursor;
SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein (Potential).
SEQUENCE CAUTION: Sequence=BC028392; Type=Frameshift; Positions=418;

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 10.92 RPKM in Testis
Total median expression: 26.55 RPKM

View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -14.8042-0.352 Picture PostScript Text
3' UTR -95.30478-0.199 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q5SY80
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
Protein SequenceProtein Sequence    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Cellular Component:
GO:0005886 plasma membrane
GO:0005929 cilium
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0031514 motile cilium
GO:0036128 CatSper complex
GO:0042995 cell projection
GO:0097228 sperm principal piece

-  Descriptions from all associated GenBank mRNAs
  AK027205 - Homo sapiens cDNA: FLJ23552 fis, clone LNG09069.
BC032859 - Homo sapiens chromosome 1 open reading frame 101, mRNA (cDNA clone MGC:33370 IMAGE:5269307), complete cds.
BC028392 - Homo sapiens chromosome 1 open reading frame 101, mRNA (cDNA clone IMAGE:4823002), with apparent retained intron.
BX648685 - Homo sapiens mRNA; cDNA DKFZp686A0738 (from clone DKFZp686A0738).
AK303059 - Homo sapiens cDNA FLJ58653 complete cds.
AK302609 - Homo sapiens cDNA FLJ61666 complete cds.
DQ891006 - Synthetic construct clone IMAGE:100003636; FLH168458.01X; RZPDo839H0192D chromosome 1 open reading frame 101 (C1orf101) gene, encodes complete protein.
EU176575 - Synthetic construct Homo sapiens clone IMAGE:100011365; FLH168457.01L; RZPDo839B01254D chromosome 1 open reading frame 101 (C1orf101) gene, encodes complete protein.
KJ900525 - Synthetic construct Homo sapiens clone ccsbBroadEn_09919 C1orf101 gene, encodes complete protein.
JD276366 - Sequence 257390 from Patent EP1572962.
CU689566 - Synthetic construct Homo sapiens gateway clone IMAGE:100020429 5' read C1orf101 mRNA.
JD287142 - Sequence 268166 from Patent EP1572962.
JD503440 - Sequence 484464 from Patent EP1572962.
JD545537 - Sequence 526561 from Patent EP1572962.
JD486547 - Sequence 467571 from Patent EP1572962.
JD254460 - Sequence 235484 from Patent EP1572962.
JD307822 - Sequence 288846 from Patent EP1572962.
JD250765 - Sequence 231789 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: B4DZR4, B7Z7X5, C1orf101, CA101_HUMAN, E9PEA3, ENST00000366533.1, ENST00000366533.2, ENST00000366533.3, ENST00000366533.4, ENST00000366533.5, ENST00000366533.6, ENST00000366533.7, NM_173807, Q5SY80, Q8IYZ6, uc001ial.1, uc001ial.2, uc001ial.3, uc001ial.4
UCSC ID: ENST00000366533.8
RefSeq Accession: NM_173807
Protein: Q5SY80 (aka CA101_HUMAN)
CCDS: CCDS1625.1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.