Human Gene ZEB1-AS1 (ENST00000441257.1) Description and Page Index
  Description: ZEB1 antisense RNA 1 (from HGNC ZEB1-AS1)
RefSeq Summary (NR_024284): This locus produces long non-coding RNA that is transcribed from a shared bi-directional promoter with zinc finger E-box binding homeobox 1 (ZEB1). This transcript binds lysine methyltransferase 2A and promotes histone modifications that are thought to promote expression of ZEB1. Expression of this gene is correlated with tumor progression. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2017]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: DB121883.1, SRR1660805.122599.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END##
Gencode Transcript: ENST00000441257.1
Gencode Gene: ENSG00000237036.5
Transcript (Including UTRs)
   Position: hg38 chr10:31,318,088-31,319,027 Size: 940 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:31,318,088-31,319,027)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerHGNCLynxPubMed

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 4.51 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 89.79 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK026657 - Homo sapiens cDNA: FLJ23004 fis, clone LNG00391.
BC042008 - Homo sapiens hypothetical protein LOC220930, mRNA (cDNA clone IMAGE:5311364).
AK296146 - Homo sapiens cDNA FLJ52629 complete cds.
JD161003 - Sequence 142027 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: uc010qed.1, uc010qed.2, uc010qed.3
UCSC ID: uc010qed.3
RefSeq Accession: NR_024284

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.