Human Gene HOXA10-AS (ENST00000519935.1) Description and Page Index
  Description: Homo sapiens HOXA10 antisense RNA (HOXA10-AS), long non-coding RNA. (from RefSeq NR_046609)
Gencode Transcript: ENST00000519935.1
Gencode Gene: ENSG00000253187.2
Transcript (Including UTRs)
   Position: hg38 chr7:27,168,899-27,171,915 Size: 3,017 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:27,168,899-27,171,915)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 44.70 RPKM in Uterus
Total median expression: 311.08 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  HZ480928 - JP 2015535430-A/1434: TERMINALLY MODIFIED RNA.
HZ790859 - JP 2016504050-A/2604: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
JC513591 - Sequence 3844 from Patent WO2014113089.
LQ071179 - Sequence 1503 from Patent EP2964234.
MA644680 - JP 2017113010-A/2604: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
MA732564 - JP 2017140048-A/1434: TERMINALLY MODIFIED RNA.
HZ480929 - JP 2015535430-A/1435: TERMINALLY MODIFIED RNA.
HZ790860 - JP 2016504050-A/2605: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
JC513592 - Sequence 3845 from Patent WO2014113089.
LQ071180 - Sequence 1504 from Patent EP2964234.
MA644681 - JP 2017113010-A/2605: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
MA732565 - JP 2017140048-A/1435: TERMINALLY MODIFIED RNA.
JD458527 - Sequence 439551 from Patent EP1572962.
JD417036 - Sequence 398060 from Patent EP1572962.
MA801733 - JP 2018183181-A/2604: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
MA801734 - JP 2018183181-A/2605: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046609, uc031swt.1
UCSC ID: uc031swt.1
RefSeq Accession: NR_046609

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.