Human Gene CACNA1C-IT3 (ENST00000542680.1) Description and Page Index
  Description: Homo sapiens CACNA1C intronic transcript 3 (CACNA1C-IT3), long non-coding RNA. (from RefSeq NR_046769)
Gencode Transcript: ENST00000542680.1
Gencode Gene: ENSG00000256721.1
Transcript (Including UTRs)
   Position: hg38 chr12:2,269,776-2,288,937 Size: 19,162 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionOther SpeciesmRNA DescriptionsOther Names
Methods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:2,269,776-2,288,937)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerHGNCLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 4.55 RPKM in Testis
Total median expression: 4.60 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
 

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046769, uc031qfn.1, uc031qfn.2
UCSC ID: uc031qfn.2
RefSeq Accession: NR_046769

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.