Human Gene YPEL3 (ENST00000562641.1) Description and Page Index
  Description: yippee like 3 (from HGNC YPEL3)
Gencode Transcript: ENST00000562641.1
Gencode Gene: ENSG00000090238.12
Transcript (Including UTRs)
   Position: hg38 chr16:30,093,762-30,096,012 Size: 2,251 Total Exon Count: 3 Strand: -
Coding Region
   Position: hg38 chr16:30,094,759-30,095,482 Size: 724 Coding Exon Count: 3 

Page IndexSequence and LinksCTDRNA-Seq ExpressionRNA StructureOther Species
mRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:30,093,762-30,096,012)mRNA (may differ from genome)Protein (137 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneCardsHGNCLynx
MGIPubMedStanford SOURCEUniProtKBWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 127.56 RPKM in Whole Blood
Total median expression: 1916.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -206.30530-0.389 Picture PostScript Text
3' UTR -312.40997-0.313 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
MGIRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Descriptions from all associated GenBank mRNAs
  LF207899 - JP 2014500723-A/15402: Polycomb-Associated Non-Coding RNAs.
MA443476 - JP 2018138019-A/15402: Polycomb-Associated Non-Coding RNAs.
BC005009 - Homo sapiens yippee-like 3 (Drosophila), mRNA (cDNA clone MGC:10500 IMAGE:3639517), complete cds.
BC050664 - Homo sapiens yippee-like 3 (Drosophila), mRNA (cDNA clone MGC:60184 IMAGE:5748830), complete cds.
AB098737 - Homo sapiens YPEL3 mRNA for yippee-like 3, complete cds.
AF305622 - Homo sapiens DiGeorge syndrome-related protein FKSG5 mRNA, complete cds.
KJ906353 - Synthetic construct Homo sapiens clone ccsbBroadEn_16023 YPEL3 gene, encodes complete protein.
KJ903359 - Synthetic construct Homo sapiens clone ccsbBroadEn_12753 YPEL3 gene, encodes complete protein.
AK026047 - Homo sapiens cDNA: FLJ22394 fis, clone HRC07882.
AK022409 - Homo sapiens cDNA FLJ12347 fis, clone MAMMA1002298.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0B4J290, AK022409, uc002dwn.1, uc002dwn.2
UCSC ID: uc002dwn.2
RefSeq Accession: NM_031477

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.