Human Gene VWCE (ENST00000613271.4) Description and Page Index
  Description: von Willebrand factor C and EGF domains (from HGNC VWCE)
Gencode Transcript: ENST00000613271.4
Gencode Gene: ENSG00000167992.13
Transcript (Including UTRs)
   Position: hg38 chr11:61,258,289-61,291,342 Size: 33,054 Total Exon Count: 22 Strand: -
Coding Region
   Position: hg38 chr11:61,258,675-61,281,173 Size: 22,499 Coding Exon Count: 17 

Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionRNA Structure
Other SpeciesmRNA DescriptionsOther NamesMethods
Data last updated: 2019-09-04

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:61,258,289-61,291,342)mRNA (may differ from genome)Protein (670 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerGeneCardsHGNCLynxMGI
PubMedStanford SOURCEUniProtKB

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 10.61 RPKM in Ovary
Total median expression: 71.56 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -245.40633-0.388 Picture PostScript Text
3' UTR -167.50386-0.434 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene Details     
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-  Descriptions from all associated GenBank mRNAs
  AK056571 - Homo sapiens cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to FIBULIN-1, ISOFORM A PRECURSOR.
AY205235 - Homo sapiens URG11 mRNA, complete cds.
BC142624 - Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA clone MGC:164797 IMAGE:40147481), complete cds.
BC042143 - Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA clone IMAGE:5930956), containing frame-shift errors.
BC052564 - Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA clone IMAGE:6305411), containing frame-shift errors.
BC077719 - Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA clone IMAGE:6305035), containing frame-shift errors.
JD538424 - Sequence 519448 from Patent EP1572962.
JD561960 - Sequence 542984 from Patent EP1572962.
JD323642 - Sequence 304666 from Patent EP1572962.
JD044590 - Sequence 25614 from Patent EP1572962.
JD455765 - Sequence 436789 from Patent EP1572962.
JD270005 - Sequence 251029 from Patent EP1572962.
AK302241 - Homo sapiens cDNA FLJ51386 complete cds.
JD204819 - Sequence 185843 from Patent EP1572962.
KJ895845 - Synthetic construct Homo sapiens clone ccsbBroadEn_05239 VWCE gene, encodes complete protein.
AK299583 - Homo sapiens cDNA FLJ58937 complete cds.
JD102289 - Sequence 83313 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A087WVD8, AK056571, uc058byn.1
UCSC ID: uc058byn.1
RefSeq Accession: NM_152718

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.