Human Gene TRIM17 (ENST00000295033.7) Description and Page Index
Description: May function as an ubiquitin E3 ligase. (from UniProt Q9Y577) RefSeq Summary (NM_001024940): The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to cytoplasmic bodies. The protein is expressed almost exclusively in the testis, but its function is unknown. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jul 2008]. Gencode Transcript: ENST00000295033.7 Gencode Gene: ENSG00000162931.12 Transcript (Including UTRs) Position: hg38 chr1:228,408,036-228,416,664 Size: 8,629 Total Exon Count: 7 Strand: - Coding Region Position: hg38 chr1:228,408,201-228,415,072 Size: 6,872 Coding Exon Count: 6
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q9Y577
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.