Human Gene GPR81 (uc001ucw.1) Description and Page Index
  Description: G protein-coupled receptor 81
RefSeq Summary (NM_032554): G protein-coupled receptors (GPCRs, or GPRs), such as GPR81, contain 7 transmembrane domains and transduce extracellular signals through heterotrimeric G proteins.[supplied by OMIM, Feb 2005]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript is intronless :: SRR1803615.5340.1, AK289557.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END##
Transcript (Including UTRs)
   Position: hg18 chr12:121,670,777-121,781,343 Size: 110,567 Total Exon Count: 5 Strand: -


Page IndexSequence and LinksMicroarray ExpressionOther SpeciesmRNA DescriptionsOther Names
Model InformationMethods
Data last updated: 2009-03-03

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:121,670,777-121,781,343)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerGeneNetworkH-INVOMIM
PubMedSeattleSNPs PGAStanford SOURCETreefam

-  Microarray Expression Data
 
Expression ratio colors:

GNF Expression Atlas 2 Data from U133A and GNF1H Chips

      
      
      
     
    
     
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Affymetrix All Exon Microarrays

           
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK122659 - Homo sapiens cDNA FLJ16094 fis, clone SPLEN2004662, moderately similar to PROBABLE G PROTEIN-COUPLED RECEPTOR HM74.
JD451226 - Sequence 432250 from Patent EP1572962.
JD109227 - Sequence 90251 from Patent EP1572962.
JD109226 - Sequence 90250 from Patent EP1572962.
AF385431 - Homo sapiens T-cell activation G protein-coupled receptor mRNA, complete cds.
AF385432 - Homo sapiens T-cell activation G protein-coupled receptor splice variant 1 mRNA, complete cds.
AK289557 - Homo sapiens cDNA FLJ78197 complete cds, highly similar to Homo sapiens T-cell activation G protein-coupled receptor mRNA.
AF345568 - Homo sapiens putative chemokine receptor (FKSG80) mRNA, complete cds.
BC066881 - Homo sapiens G protein-coupled receptor 81, mRNA (cDNA clone MGC:79318 IMAGE:6971816), complete cds.
BC066882 - Homo sapiens G protein-coupled receptor 81, mRNA (cDNA clone MGC:79320 IMAGE:6971819), complete cds.
BC066883 - Homo sapiens G protein-coupled receptor 81, mRNA (cDNA clone MGC:79321 IMAGE:6971820), complete cds.
BC067484 - Homo sapiens G protein-coupled receptor 81, mRNA (cDNA clone MGC:79319 IMAGE:6971817), complete cds.
GQ129268 - Synthetic construct Homo sapiens clone HAIB:100068568; DKFZo008C0335 G protein-coupled receptor 81 protein (GPR81) gene, complete cds.
AY507143 - Homo sapiens putative chemokine receptor mRNA, complete cds.
EU809458 - Homo sapiens G-protein coupled receptor 81 (GPR81) mRNA, complete cds.
AK313955 - Homo sapiens cDNA, FLJ94601, Homo sapiens G protein-coupled receptor 81 (GPR81), mRNA.
GQ129267 - Synthetic construct Homo sapiens clone HAIB:100068665; DKFZo004C0336 G protein-coupled receptor 81 protein (GPR81) gene, partial cds.
BC095506 - Homo sapiens G protein-coupled receptor 81, mRNA (cDNA clone IMAGE:6912801), partial cds.
JD393502 - Sequence 374526 from Patent EP1572962.
KJ893611 - Synthetic construct Homo sapiens clone ccsbBroadEn_03005 HCAR1 gene, encodes complete protein.
JD320640 - Sequence 301664 from Patent EP1572962.
JD271939 - Sequence 252963 from Patent EP1572962.
JD309834 - Sequence 290858 from Patent EP1572962.
JD055023 - Sequence 36047 from Patent EP1572962.
JD097165 - Sequence 78189 from Patent EP1572962.
JD201910 - Sequence 182934 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AK122659, NM_032554
UCSC ID: uc001ucw.1
RefSeq Accession: NM_032554

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: yes RNA accession: AK122659.1
exon count: 5CDS single in 3' UTR: no RNA size: 2748
ORF size: 0CDS single in intron: no Alignment % ID: 99.60
txCdsPredict score: 1598.00frame shift in genome: no % Coverage: 99.96
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.