Human Gene WDR83OS (ENST00000596731.7) from GENCODE V44
Description: Homo sapiens WD repeat domain 83 opposite strand (WDR83OS), mRNA. (from RefSeq NM_016145)
Gencode Transcript: ENST00000596731.7
Gencode Gene: ENSG00000105583.11
Transcript (Including UTRs)
Position: hg38 chr19:12,668,073-12,669,415 Size: 1,343 Total Exon Count: 4 Strand: -
Coding Region
Position: hg38 chr19:12,668,359-12,669,403 Size: 1,045 Coding Exon Count: 4
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: ASTER_HUMAN
DESCRIPTION: RecName: Full=Protein Asterix; AltName: Full=WD repeat domain 83 opposite strand; AltName: Full=WDR83 opposite strand;
SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein (Potential).SIMILARITY: Belongs to the Asterix family.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
Microarray Expression Data
Press "+" in the title bar above to open this section.
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR005351 - UPF0139
Pfam Domains: PF03669 - Uncharacterised protein family (UPF0139)
ModBase Predicted Comparative 3D Structure on Q9Y284
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
LF384415 - JP 2014500723-A/191918: Polycomb-Associated Non-Coding RNAs.MA619992 - JP 2018138019-A/191918: Polycomb-Associated Non-Coding RNAs.LF208196 - JP 2014500723-A/15699: Polycomb-Associated Non-Coding RNAs.MA443773 - JP 2018138019-A/15699: Polycomb-Associated Non-Coding RNAs.BC001192 - Homo sapiens chromosome 19 open reading frame 56, mRNA (cDNA clone IMAGE:3355084), partial cds.BC042919 - Homo sapiens chromosome 19 open reading frame 56, mRNA (cDNA clone MGC:52191 IMAGE:5932109), complete cds.AK091030 - Homo sapiens cDNA FLJ33711 fis, clone BRAWH2008219.AF059620 - Homo sapiens clone 015e06 My006 protein mRNA, complete cds.BC061912 - Homo sapiens chromosome 19 open reading frame 56, mRNA (cDNA clone MGC:70730 IMAGE:4444565), complete cds.AF078861 - Homo sapiens PTD008 mRNA, complete cds.AF151898 - Homo sapiens CGI-140 protein mRNA, complete cds.JD426299 - Sequence 407323 from Patent EP1572962.JD163661 - Sequence 144685 from Patent EP1572962.JD255199 - Sequence 236223 from Patent EP1572962.JD416864 - Sequence 397888 from Patent EP1572962.LF373415 - JP 2014500723-A/180918: Polycomb-Associated Non-Coding RNAs.MA608992 - JP 2018138019-A/180918: Polycomb-Associated Non-Coding RNAs.JD126534 - Sequence 107558 from Patent EP1572962.JD455986 - Sequence 437010 from Patent EP1572962.JD514598 - Sequence 495622 from Patent EP1572962.LF373414 - JP 2014500723-A/180917: Polycomb-Associated Non-Coding RNAs.MA608991 - JP 2018138019-A/180917: Polycomb-Associated Non-Coding RNAs.JD167556 - Sequence 148580 from Patent EP1572962.JD202273 - Sequence 183297 from Patent EP1572962.AK311944 - Homo sapiens cDNA, FLJ92212, Homo sapiens PTD008 protein (PTD008), mRNA.HQ448572 - Synthetic construct Homo sapiens clone IMAGE:100072010; CCSB012058_01 chromosome 19 open reading frame 56 (C19orf56) gene, encodes complete protein.KJ893905 - Synthetic construct Homo sapiens clone ccsbBroadEn_03299 WDR83OS gene, encodes complete protein.JD030331 - Sequence 11355 from Patent EP1572962.JD025979 - Sequence 7003 from Patent EP1572962.LF373411 - JP 2014500723-A/180914: Polycomb-Associated Non-Coding RNAs.MA608988 - JP 2018138019-A/180914: Polycomb-Associated Non-Coding RNAs.
Other Names for This Gene
Alternate Gene Symbols: ASTER_HUMAN, B2R4T8, C19orf56, CGI-140, ENST00000596731.1, ENST00000596731.2, ENST00000596731.3, ENST00000596731.4, ENST00000596731.5, ENST00000596731.6, My006, NM_016145, PTD008, Q9BVI3, Q9Y284, uc002mud.1, uc002mud.2, uc002mud.3, uc002mud.4, uc002mud.5UCSC ID: ENST00000596731.7RefSeq Accession: NM_016145
Protein: Q9Y284
(aka ASTER_HUMAN)
CCDS: CCDS12274.1
Methods, Credits, and Use Restrictions
Click here
for details on how this gene model was made and data restrictions if any.