Human Gene ZNF582-AS1 (uc002qna.2) Description and Page Index
  Description: Homo sapiens ZNF582 antisense RNA 1 (head to head) (ZNF582-AS1), transcript variant 3, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr19:56,905,045-56,910,539 Size: 5,495 Total Exon Count: 4 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:56,905,045-56,910,539)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerHGNCLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 5.60 RPKM in Brain - Cerebellum
Total median expression: 111.48 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC040939 - Homo sapiens hypothetical protein BC036928, mRNA (cDNA clone IMAGE:5172592), partial cds.
BC036928 - Homo sapiens hypothetical protein BC036928, mRNA (cDNA clone IMAGE:5245127), partial cds.
BC024249 - Homo sapiens hypothetical protein BC036928, mRNA (cDNA clone IMAGE:4816003).
DQ589633 - Homo sapiens piRNA piR-56745, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_037161
UCSC ID: uc002qna.2
RefSeq Accession: NR_037161

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_037161.1
exon count: 4CDS single in 3' UTR: no RNA size: 1348
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 228.00frame shift in genome: no % Coverage: 97.77
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: yes # AT/AC introns 0
selenocysteine: no end bleed into intron: 541# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.