Human Gene ZNF667-AS1 (uc002qng.3) Description and Page Index
  Description: Homo sapiens ZNF667 antisense RNA 1 (head to head) (ZNF667-AS1), transcript variant 2, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr19:56,989,493-57,006,805 Size: 17,313 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksMalaCardsRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:56,989,493-57,006,805)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerH-INVPubMedStanford SOURCE

-  MalaCards Disease Associations
  MalaCards Gene Search: ZNF667-AS1
Diseases sorted by gene-association score: aorta angiosarcoma (7)

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 36.00 RPKM in Pituitary
Total median expression: 657.30 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK302988 - Homo sapiens cDNA FLJ52614 complete cds.
BC110411 - Homo sapiens cDNA clone IMAGE:5753168.
BC008651 - Homo sapiens hypothetical protein MGC9913, mRNA (cDNA clone IMAGE:3870821), complete cds.
KJ905095 - Synthetic construct Homo sapiens clone ccsbBroadEn_14489 LOC100128252 gene, encodes complete protein.

-  Other Names for This Gene
  Alternate Gene Symbols: BC008651
UCSC ID: uc002qng.3
RefSeq Accession: NR_036522

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BC008651.1
exon count: 3CDS single in 3' UTR: no RNA size: 677
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 264.00frame shift in genome: no % Coverage: 97.93
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.