Human Gene KANSL1L (ENST00000281772.14) from GENCODE V44
Description: Homo sapiens KAT8 regulatory NSL complex subunit 1 like (KANSL1L), transcript variant 1, mRNA. (from RefSeq NM_152519)
Gencode Transcript: ENST00000281772.14
Gencode Gene: ENSG00000144445.17
Transcript (Including UTRs)
Position: hg38 chr2:210,021,421-210,171,409 Size: 149,989 Total Exon Count: 15 Strand: -
Coding Region
Position: hg38 chr2:210,022,949-210,154,582 Size: 131,634 Coding Exon Count: 14
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: KAL1L_HUMAN
DESCRIPTION: RecName: Full=KAT8 regulatory NSL complex subunit 1-like protein; AltName: Full=MSL1v2;
SEQUENCE CAUTION: Sequence=BAB85085.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAB85085.1; Type=Erroneous termination; Positions=914; Note=Translated as Trp; Sequence=BAB85085.1; Type=Frameshift; Positions=496, 502, 550, 553, 673, 676, 755, 757, 853;
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR026180 - NSL1
ModBase Predicted Comparative 3D Structure on A0AUZ9
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Cellular Component: GO:0000123 histone acetyltransferase complex
Descriptions from all associated GenBank mRNAs
AK074441 - Homo sapiens cDNA FLJ23861 fis, clone LNG08328.BC090854 - Homo sapiens hypothetical protein FLJ23861, mRNA (cDNA clone IMAGE:6197078).BC126155 - Homo sapiens chromosome 2 open reading frame 67, mRNA (cDNA clone MGC:161433 IMAGE:8991871), complete cds.BC143914 - Homo sapiens chromosome 2 open reading frame 67, mRNA (cDNA clone MGC:177449 IMAGE:9052432), complete cds.HQ258521 - Synthetic construct Homo sapiens clone IMAGE:100072950 Unknown protein gene, encodes complete protein.KJ903876 - Synthetic construct Homo sapiens clone ccsbBroadEn_13270 KANSL1L gene, encodes complete protein.BC032837 - Homo sapiens chromosome 2 open reading frame 67, mRNA (cDNA clone MGC:27010 IMAGE:4829661), complete cds.AK056911 - Homo sapiens cDNA FLJ32349 fis, clone PROST2007237.KJ903875 - Synthetic construct Homo sapiens clone ccsbBroadEn_13269 KANSL1L gene, encodes complete protein.BC070141 - Homo sapiens chromosome 2 open reading frame 67, mRNA (cDNA clone IMAGE:6615864), partial cds.JD344990 - Sequence 326014 from Patent EP1572962.JD283988 - Sequence 265012 from Patent EP1572962.JD167579 - Sequence 148603 from Patent EP1572962.JD553469 - Sequence 534493 from Patent EP1572962.JD505059 - Sequence 486083 from Patent EP1572962.AL133053 - Homo sapiens mRNA; cDNA DKFZp434H1215 (from clone DKFZp434H1215); partial cds.JD186061 - Sequence 167085 from Patent EP1572962.JD253754 - Sequence 234778 from Patent EP1572962.JD126607 - Sequence 107631 from Patent EP1572962.JD239118 - Sequence 220142 from Patent EP1572962.JD089820 - Sequence 70844 from Patent EP1572962.JD539165 - Sequence 520189 from Patent EP1572962.JD331485 - Sequence 312509 from Patent EP1572962.JD302187 - Sequence 283211 from Patent EP1572962.JD433132 - Sequence 414156 from Patent EP1572962.JD199863 - Sequence 180887 from Patent EP1572962.JD200761 - Sequence 181785 from Patent EP1572962.JD282400 - Sequence 263424 from Patent EP1572962.JD363484 - Sequence 344508 from Patent EP1572962.JD104858 - Sequence 85882 from Patent EP1572962.JD165837 - Sequence 146861 from Patent EP1572962.AK124963 - Homo sapiens cDNA FLJ42973 fis, clone BRTHA2001462.AK124324 - Homo sapiens cDNA FLJ42333 fis, clone TUTER1000122.AK308432 - Homo sapiens cDNA, FLJ98380.
Other Names for This Gene
Alternate Gene Symbols: A0AUZ9, B7ZLN1, C2orf67, ENST00000281772.1, ENST00000281772.10, ENST00000281772.11, ENST00000281772.12, ENST00000281772.13, ENST00000281772.2, ENST00000281772.3, ENST00000281772.4, ENST00000281772.5, ENST00000281772.6, ENST00000281772.7, ENST00000281772.8, ENST00000281772.9, KAL1L_HUMAN, NM_152519, Q53TV8, Q53TW3, Q6IS05, Q8TCI1, Q96MI0, Q9UFC3, uc002vds.1, uc002vds.2, uc002vds.3, uc002vds.4, uc002vds.5UCSC ID: ENST00000281772.14RefSeq Accession: NM_152519
Protein: A0AUZ9
(aka KAL1L_HUMAN)
CCDS: CCDS33370.1 , CCDS77519.1
Methods, Credits, and Use Restrictions
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