The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q5JXA9
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Gene Ontology (GO) Annotations with Structured Vocabulary
Cellular Component: GO:0016020 membrane GO:0016021 integral component of membrane
Descriptions from all associated GenBank mRNAs
AK095499 - Homo sapiens cDNA FLJ38180 fis, clone FCBBF1000121, weakly similar to Homo sapiens mRNA for SHPS-1. AK297072 - Homo sapiens cDNA FLJ59715 complete cds. AK294440 - Homo sapiens cDNA FLJ52409 complete cds. AY424277 - Homo sapiens protein tyrosine phosphatase non-receptor type substrate protein mRNA, complete cds, alternatively spliced. JD133218 - Sequence 114242 from Patent EP1572962. AK097113 - Homo sapiens cDNA FLJ39794 fis, clone SPLEN2003924, highly similar to HEAT SHOCK 70 KDA PROTEIN 1. JD205752 - Sequence 186776 from Patent EP1572962. JD186373 - Sequence 167397 from Patent EP1572962. JD057851 - Sequence 38875 from Patent EP1572962.