Human Gene BC041449 (uc002yoz.1) Description and Page Index
  Description: Homo sapiens, clone IMAGE:5171428, mRNA.
Transcript (Including UTRs)
   Position: hg19 chr21:33,026,871-33,031,813 Size: 4,943 Total Exon Count: 3 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr21:33,026,871-33,031,813)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.69 RPKM in Testis
Total median expression: 5.30 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC041449 - Homo sapiens, clone IMAGE:5171428, mRNA.
DQ598465 - Homo sapiens piRNA piR-36531, complete sequence.
JD075097 - Sequence 56121 from Patent EP1572962.
DQ579050 - Homo sapiens piRNA piR-47162, complete sequence.
DQ593310 - Homo sapiens piRNA piR-33422, complete sequence.
DQ593191 - Homo sapiens piRNA piR-33303, complete sequence.
DQ598507 - Homo sapiens piRNA piR-36573, complete sequence.
JD501034 - Sequence 482058 from Patent EP1572962.
DQ598371 - Homo sapiens piRNA piR-36437, complete sequence.
LF210662 - JP 2014500723-A/18165: Polycomb-Associated Non-Coding RNAs.
MA446239 - JP 2018138019-A/18165: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  UCSC ID: uc002yoz.1
Representative RNA: BC041449

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BC041449.1
exon count: 3CDS single in 3' UTR: no RNA size: 1856
ORF size: 0CDS single in intron: no Alignment % ID: 99.94
txCdsPredict score: 390.50frame shift in genome: no % Coverage: 68.32
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.