Human Gene CRYBB2P1 (uc003abv.3) Description and Page Index
  Description: Homo sapiens crystallin, beta B2 pseudogene 1 (CRYBB2P1), transcript variant 2, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr22:25,851,679-25,907,585 Size: 55,907 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr22:25,851,679-25,907,585)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerHGNCLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 5.39 RPKM in Testis
Total median expression: 124.31 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC047380 - Homo sapiens crystallin, beta B2 pseudogene 1, mRNA (cDNA clone IMAGE:5288881).
BC037884 - Homo sapiens crystallin, beta B2 pseudogene 1, mRNA (cDNA clone IMAGE:5274560).
BC004918 - Homo sapiens cDNA clone IMAGE:3542716, partial cds.
JD483578 - Sequence 464602 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC004918
UCSC ID: uc003abv.3
RefSeq Accession: NR_033734

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: BC004918.2
exon count: 6CDS single in 3' UTR: no RNA size: 1566
ORF size: 0CDS single in intron: no Alignment % ID: 99.61
txCdsPredict score: 171.50frame shift in genome: no % Coverage: 98.98
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.