Human Gene RABL3 (ENST00000273375.7) Description and Page Index
Description: Homo sapiens RAB, member of RAS oncogene family like 3 (RABL3), transcript variant 2, mRNA. (from RefSeq NM_173825)
Gencode Transcript: ENST00000273375.7
Gencode Gene: ENSG00000144840.9
Transcript (Including UTRs)
Position: hg38 chr3:120,686,681-120,742,537 Size: 55,857 Total Exon Count: 8 Strand: -
Position: hg38 chr3:120,689,823-120,742,507 Size: 52,685 Coding Exon Count: 8
Data last updated at UCSC: 2019-09-04
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
DESCRIPTION: RecName: Full=Rab-like protein 3;
SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
Comparative Toxicogenomics Database (CTD)
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
Press "+" in the title bar above to open this section.
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR001806 - Small_GTPase
Pfam Domains: PF00071 - Ras family
ModBase Predicted Comparative 3D Structure on Q5HYI8
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
BX647664 - Homo sapiens mRNA; cDNA DKFZp313O171 (from clone DKFZp313O171). BX647593 - Homo sapiens mRNA; cDNA DKFZp313M1333 (from clone DKFZp313M1333). BX647559 - Homo sapiens mRNA; cDNA DKFZp313A1611 (from clone DKFZp313A1611). BC020832 - Homo sapiens RAB, member of RAS oncogene family-like 3, mRNA (cDNA clone MGC:23920 IMAGE:4771781), complete cds. LF210606 - JP 2014500723-A/18109: Polycomb-Associated Non-Coding RNAs. MA446183 - JP 2018138019-A/18109: Polycomb-Associated Non-Coding RNAs. LF213804 - JP 2014500723-A/21307: Polycomb-Associated Non-Coding RNAs. MA449381 - JP 2018138019-A/21307: Polycomb-Associated Non-Coding RNAs. AK293085 - Homo sapiens cDNA FLJ75867 complete cds, highly similar to Homo sapiens RAB, member of RAS oncogene family-like 3 (RABL3),mRNA. KJ900581 - Synthetic construct Homo sapiens clone ccsbBroadEn_09975 RABL3 gene, encodes complete protein. AB464115 - Synthetic construct DNA, clone: pF1KB7502, Homo sapiens RABL3 gene for RAB, member of RAS oncogene family-like 3, without stop codon, in Flexi system. AK025772 - Homo sapiens cDNA: FLJ22119 fis, clone HEP18852. JD096477 - Sequence 77501 from Patent EP1572962. JD112244 - Sequence 93268 from Patent EP1572962. JD144560 - Sequence 125584 from Patent EP1572962. JD283289 - Sequence 264313 from Patent EP1572962. JD144559 - Sequence 125583 from Patent EP1572962. JD144561 - Sequence 125585 from Patent EP1572962. JD212472 - Sequence 193496 from Patent EP1572962. JD542600 - Sequence 523624 from Patent EP1572962. JD376010 - Sequence 357034 from Patent EP1572962. JD497684 - Sequence 478708 from Patent EP1572962. JD497685 - Sequence 478709 from Patent EP1572962. JD259497 - Sequence 240521 from Patent EP1572962. JD122406 - Sequence 103430 from Patent EP1572962. JD467693 - Sequence 448717 from Patent EP1572962. JD245122 - Sequence 226146 from Patent EP1572962. JD453952 - Sequence 434976 from Patent EP1572962. JD134581 - Sequence 115605 from Patent EP1572962. LF339233 - JP 2014500723-A/146736: Polycomb-Associated Non-Coding RNAs. MA574810 - JP 2018138019-A/146736: Polycomb-Associated Non-Coding RNAs. JD538761 - Sequence 519785 from Patent EP1572962. JD413690 - Sequence 394714 from Patent EP1572962. LF339232 - JP 2014500723-A/146735: Polycomb-Associated Non-Coding RNAs. MA574809 - JP 2018138019-A/146735: Polycomb-Associated Non-Coding RNAs. JD268765 - Sequence 249789 from Patent EP1572962. JD394327 - Sequence 375351 from Patent EP1572962. JD095192 - Sequence 76216 from Patent EP1572962. JD237733 - Sequence 218757 from Patent EP1572962. JD241072 - Sequence 222096 from Patent EP1572962. JD304651 - Sequence 285675 from Patent EP1572962. JD226774 - Sequence 207798 from Patent EP1572962. JD549189 - Sequence 530213 from Patent EP1572962. JD275346 - Sequence 256370 from Patent EP1572962. LF339231 - JP 2014500723-A/146734: Polycomb-Associated Non-Coding RNAs. MA574808 - JP 2018138019-A/146734: Polycomb-Associated Non-Coding RNAs. JD027103 - Sequence 8127 from Patent EP1572962. JD028578 - Sequence 9602 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: NM_173825, Q5HYI8, Q8WUD3, RABL3_HUMAN, uc003edx.1, uc003edx.2, uc003edx.3 UCSC ID: uc003edx.3 RefSeq Accession: NM_173825
(aka RABL3_HUMAN) Q5HYI8
Methods, Credits, and Use Restrictions
for details on how this gene model was made and data restrictions if any.