Human Gene ROPN1L (ENST00000274134.5) from GENCODE V44
Description: Homo sapiens rhophilin associated tail protein 1 like (ROPN1L), transcript variant 1, mRNA. (from RefSeq NM_031916) RefSeq Summary (NM_031916): This gene encodes a member of the ropporin family. The encoded protein is present in sperm and interacts with A-kinase anchoring protein, AKAP3, through the amphipathic helix region of AKAP3. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2014]. Gencode Transcript: ENST00000274134.5 Gencode Gene: ENSG00000145491.12 Transcript (Including UTRs) Position: hg38 chr5:10,441,879-10,465,026 Size: 23,148 Total Exon Count: 5 Strand: + Coding Region Position: hg38 chr5:10,442,168-10,464,947 Size: 22,780 Coding Exon Count: 5
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q96C74
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.