Human Gene NR2F1-AS1 (uc003kkf.2) Description and Page Index
  Description: Homo sapiens NR2F1 antisense RNA 1 (NR2F1-AS1), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr5:92,745,065-92,917,003 Size: 171,939 Total Exon Count: 7 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr5:92,745,065-92,917,003)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
ExonPrimerGeneNetworkH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 7.54 RPKM in Brain - Frontal Cortex (BA9)
Total median expression: 100.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK124699 - Homo sapiens cDNA FLJ42709 fis, clone BRAMY3007350.
BX647510 - Homo sapiens mRNA; cDNA DKFZp686H18199 (from clone DKFZp686H18199).
BC042879 - Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:5313822).
AK311143 - Homo sapiens cDNA, FLJ18185.
BC018089 - Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:4798404).
BC044619 - Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:5270292).
BC048999 - Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:5266254).
AK296281 - Homo sapiens cDNA FLJ53796 complete cds.
BC144330 - Homo sapiens cDNA clone IMAGE:9052850.
BC144331 - Homo sapiens cDNA clone IMAGE:9052851.
JD019966 - Sequence 990 from Patent EP1572962.
JD029458 - Sequence 10482 from Patent EP1572962.
JD022530 - Sequence 3554 from Patent EP1572962.
JD027753 - Sequence 8777 from Patent EP1572962.
BC010610 - Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:4214515).
AK095719 - Homo sapiens cDNA FLJ38400 fis, clone FEBRA2008159.
AK311323 - Homo sapiens cDNA, FLJ18365.
JD317506 - Sequence 298530 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC042879
UCSC ID: uc003kkf.2
RefSeq Accession: NR_015369

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BC042879.1
exon count: 7CDS single in 3' UTR: no RNA size: 2261
ORF size: 0CDS single in intron: no Alignment % ID: 99.87
txCdsPredict score: 36.50frame shift in genome: no % Coverage: 99.34
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.