Human Gene SSC4D (ENST00000275560.4) from GENCODE V44
Description: Homo sapiens scavenger receptor cysteine rich family member with 4 domains (SSC4D), mRNA. (from RefSeq NM_080744) RefSeq Summary (NM_080744): The scavenger receptor cysteine-rich (SRCR) superfamily is an ancient and highly conserved group of cell surface and/or secreted proteins, some of which are involved in the development of the immune system and the regulation of both innate and adaptive immune responses. Group B SRCR domains usually contain 8 regularly spaced cysteines that give rise to a well-defined intradomain disulfide-bond pattern.[supplied by OMIM, Apr 2004]. Gencode Transcript: ENST00000275560.4 Gencode Gene: ENSG00000146700.9 Transcript (Including UTRs) Position: hg38 chr7:76,389,337-76,409,697 Size: 20,361 Total Exon Count: 11 Strand: - Coding Region Position: hg38 chr7:76,390,059-76,404,439 Size: 14,381 Coding Exon Count: 10
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q8WTU2
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.