Human Gene WNT2 (ENST00000265441.8) from GENCODE V44
Description: Homo sapiens Wnt family member 2 (WNT2), transcript variant 2, non-coding RNA. (from RefSeq NR_024047) RefSeq Summary (NM_003391): This gene is a member of the WNT gene family. The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulation of cell fate and patterning during embryogenesis. Alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, Jul 2008]. Gencode Transcript: ENST00000265441.8 Gencode Gene: ENSG00000105989.10 Transcript (Including UTRs) Position: hg38 chr7:117,275,451-117,323,058 Size: 47,608 Total Exon Count: 5 Strand: - Coding Region Position: hg38 chr7:117,278,155-117,322,989 Size: 44,835 Coding Exon Count: 5
ID:WNT2_HUMAN DESCRIPTION: RecName: Full=Protein Wnt-2; AltName: Full=Int-1-like protein 1; AltName: Full=Int-1-related protein; Short=IRP; Flags: Precursor; FUNCTION: Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters. SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular matrix. TISSUE SPECIFICITY: Expressed in brain in the thalamus, in fetal and adult lung and in placenta. PTM: Palmitoylation at Ser-212 is required for efficient binding to frizzled receptors. It is also required for subsequent palmitoylation at Cys-76. Palmitoylation is necessary for proper trafficking to cell surface (By similarity). SIMILARITY: Belongs to the Wnt family.
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on P09544
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.