Human Gene ENSG00000291316 (ENST00000438911.6) from GENCODE V44
Description: Homo sapiens cysteine and histidine rich 1 (CYHR1), transcript variant 1, mRNA. (from RefSeq NM_138496)
Gencode Transcript: ENST00000438911.6
Gencode Gene: ENSG00000291316.1
Transcript (Including UTRs)
Position: hg38 chr8:144,449,582-144,465,035 Size: 15,454 Total Exon Count: 5 Strand: -
Coding Region
Position: hg38 chr8:144,450,379-144,464,901 Size: 14,523 Coding Exon Count: 5
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Primer design for this transcript
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
LF210338 - JP 2014500723-A/17841: Polycomb-Associated Non-Coding RNAs.MA445915 - JP 2018138019-A/17841: Polycomb-Associated Non-Coding RNAs.BC004544 - Homo sapiens cysteine/histidine-rich 1, mRNA (cDNA clone IMAGE:3945559), partial cds.AK160381 - Homo sapiens mRNA for FLJ00352 protein.AK094514 - Homo sapiens cDNA FLJ37195 fis, clone BRALZ2005471, highly similar to Mus musculus cysteine and histidine rich 1 (Cyhr1), transcript variant 1, mRNA.AB007965 - Homo sapiens mRNA, chromosome 1 specific transcript KIAA0496.LF337136 - JP 2014500723-A/144639: Polycomb-Associated Non-Coding RNAs.MA572713 - JP 2018138019-A/144639: Polycomb-Associated Non-Coding RNAs.BC005073 - Homo sapiens cysteine/histidine-rich 1, mRNA (cDNA clone MGC:13010 IMAGE:3533499), complete cds.BC065484 - Homo sapiens cysteine/histidine-rich 1, mRNA (cDNA clone MGC:71403 IMAGE:4638402), complete cds.BC056412 - Homo sapiens cysteine/histidine-rich 1, mRNA (cDNA clone IMAGE:5766915).LF337148 - JP 2014500723-A/144651: Polycomb-Associated Non-Coding RNAs.MA572725 - JP 2018138019-A/144651: Polycomb-Associated Non-Coding RNAs.JD232543 - Sequence 213567 from Patent EP1572962.JD525762 - Sequence 506786 from Patent EP1572962.JD466255 - Sequence 447279 from Patent EP1572962.JD149707 - Sequence 130731 from Patent EP1572962.JD215195 - Sequence 196219 from Patent EP1572962.JD356090 - Sequence 337114 from Patent EP1572962.JD040442 - Sequence 21466 from Patent EP1572962.JD130052 - Sequence 111076 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: ENST00000438911.1, ENST00000438911.2, ENST00000438911.3, ENST00000438911.4, ENST00000438911.5, NM_138496, P0DTL6, uc003zcv.1, uc003zcv.2, uc003zcv.3UCSC ID: ENST00000438911.6RefSeq Accession: NM_138496
CCDS: CCDS47943.1
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.