Human Gene GRIPAP1 (ENST00000473581.6) from GENCODE V44
  Description: GRIP1 associated protein 1 (from HGNC GRIPAP1)
RefSeq Summary (NM_020137): This gene encodes a guanine nucleotide exchange factor for the Ras family of small G proteins (RasGEF). The encoded protein interacts in a complex with glutamate receptor interacting protein 1 (GRIP1) and plays a role in the regulation of AMPA receptor function. [provided by RefSeq, Aug 2013].
Gencode Transcript: ENST00000473581.6
Gencode Gene: ENSG00000068400.14
Transcript (Including UTRs)
   Position: hg38 chrX:48,976,907-48,991,286 Size: 14,380 Total Exon Count: 16 Strand: -


Page IndexSequence and LinksPrimersCTDRNA-Seq ExpressionOther Species
mRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2023-08-18 00:09:47

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chrX:48,976,907-48,991,286)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
BioGPSEnsemblExonPrimerHGNCPubMedWikipedia

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 50.19 RPKM in Brain - Cerebellum
Total median expression: 781.45 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC110636 - Homo sapiens GRIP1 associated protein 1, mRNA (cDNA clone IMAGE:4996005), with apparent retained intron.
AL136847 - Homo sapiens mRNA; cDNA DKFZp434P0630 (from clone DKFZp434P0630).
BC001522 - Homo sapiens GRIP1 associated protein 1, mRNA (cDNA clone IMAGE:3010235), partial cds.
AB032993 - Homo sapiens mRNA for KIAA1167 protein, partial cds.
AK292158 - Homo sapiens cDNA FLJ77229 complete cds, highly similar to Homo sapiens GRIP1 associated protein 1 (GRIPAP1), transcript variant 1, mRNA.
BC101544 - Homo sapiens GRIP1 associated protein 1, mRNA (cDNA clone MGC:126593 IMAGE:8069050), complete cds.
BC101546 - Homo sapiens GRIP1 associated protein 1, mRNA (cDNA clone MGC:126595 IMAGE:8069052), complete cds.
AJ297364 - Homo sapiens partial mRNA for hypothetical protein (ORF1), RZPD clone MPMGp800B12492Q3.
DQ892726 - Synthetic construct clone IMAGE:100005356; FLH189145.01X; RZPDo839C0174D GRIP1 associated protein 1 (GRIPAP1) gene, encodes complete protein.
EU176741 - Synthetic construct Homo sapiens clone IMAGE:100011508; FLH189144.01L; RZPDo839E10255D GRIP1 associated protein 1 (GRIPAP1) gene, encodes complete protein.
AB527837 - Synthetic construct DNA, clone: pF1KB8474, Homo sapiens GRIPAP1 gene for GRIP1 associated protein 1, without stop codon, in Flexi system.
BX640704 - Homo sapiens mRNA; cDNA DKFZp686H15136 (from clone DKFZp686H15136).
BX647801 - Homo sapiens mRNA; cDNA DKFZp686D1196 (from clone DKFZp686D1196).
BX647804 - Homo sapiens mRNA; cDNA DKFZp686J0596 (from clone DKFZp686J0596).
JD401869 - Sequence 382893 from Patent EP1572962.
JD401868 - Sequence 382892 from Patent EP1572962.
JD158726 - Sequence 139750 from Patent EP1572962.
JD261869 - Sequence 242893 from Patent EP1572962.
JD421243 - Sequence 402267 from Patent EP1572962.
JD360430 - Sequence 341454 from Patent EP1572962.
JD200308 - Sequence 181332 from Patent EP1572962.
JD106424 - Sequence 87448 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BX640704, ENST00000473581.1, ENST00000473581.2, ENST00000473581.3, ENST00000473581.4, ENST00000473581.5, uc004dlz.1, uc004dlz.2, uc004dlz.3, uc004dlz.4, uc004dlz.5
UCSC ID: ENST00000473581.6
RefSeq Accession: NM_020137

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.