Mouse Gene Ugt1a5 (ENSMUST00000097659.4) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A5 (Ugt1a5), mRNA. (from RefSeq NM_201643)
Gencode Transcript: ENSMUST00000097659.4
Gencode Gene: ENSMUSG00000089943.1
Transcript (Including UTRs)
Position: mm10 chr1:88,166,012-88,218,997 Size: 52,986 Total Exon Count: 5 Strand: +
Coding Region
Position: mm10 chr1:88,166,052-88,218,424 Size: 52,373 Coding Exon Count: 5
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: B2RT14_MOUSE
DESCRIPTION: SubName: Full=MCG14318, isoform CRA_h; SubName: Full=Protein Ugt1a5; SubName: Full=UDP glucuronosyltransferase 1 family, polypeptide A5;
SIMILARITY: Belongs to the UDP-glycosyltransferase family.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR002213 - UDP_glucos_trans
Pfam Domains: PF00201 - UDP-glucoronosyl and UDP-glucosyl transferase
PF04101 - Glycosyltransferase family 28 C-terminal domain
SCOP Domains: 48201 - Uteroglobin-like
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
ModBase Predicted Comparative 3D Structure on B2RT14
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
BC089569 - Mus musculus UDP glycosyltransferase 1 family, polypeptide A10, mRNA (cDNA clone MGC:107546 IMAGE:30120494), complete cds.AY227201 - Mus musculus UDP glycosyltransferase 1 family polypeptide A13 (Ugt1a13) mRNA, complete cds.BC146021 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A9, mRNA (cDNA clone MGC:175908 IMAGE:40131324), complete cds.BC138699 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A9, mRNA (cDNA clone MGC:170326 IMAGE:8861721), complete cds.AY227200 - Mus musculus UDP glycosyltransferase 1 family polypeptide A12 (Ugt1a12) mRNA, complete cds.BC019434 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A9, mRNA (cDNA clone IMAGE:5126634).L27122 - Mus musculus (A-1) bilirubin/phenol UDP-glucuronosyltransferase (UGTBr/p) mRNA, complete cds.AK159496 - Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420021K01 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.AK128918 - Mus musculus cDNA fis, clone TRACH2025057, highly similar to UDP-glucuronosyltransferase 1-7 precursor, microsomal (EC 2.4.1.17).AK162317 - Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030623M03 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.AK165465 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530009N23 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.AK154973 - Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113I01 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.BC141205 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A7C, mRNA (cDNA clone MGC:176166 IMAGE:9055817), complete cds.BC141206 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A7C, mRNA (cDNA clone MGC:176167 IMAGE:9055818), complete cds.AY227199 - Mus musculus UDP glycosyltransferase 1 family polypeptide A10 (Ugt1a10) mRNA, complete cds.AK144599 - Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730007L19 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.AK153157 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830125J06 product:UDP glycosyltransferase 1 family, polypeptide A10, full insert sequence.BC026561 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6B, mRNA (cDNA clone MGC:36247 IMAGE:5050488), complete cds.AY227198 - Mus musculus UDP glycosyltransferase 1 family polypeptide A9 (Ugt1a9) mRNA, complete cds.U16818 - Mus musculus UDP glucuronosyltransferase (UGT1-06) mRNA, complete cds.AK162514 - Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530044G16 product:UDP glycosyltransferase 1 family, polypeptide A6, full insert sequence.BC069940 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6A, mRNA (cDNA clone MGC:78240 IMAGE:5249697), complete cds.AY227197 - Mus musculus UDP glycosyltransferase 1 family polypeptide A7 (Ugt1a7) mRNA, complete cds.U09930 - Mus musculus UGT1.6 mRNA, complete cds.D87867 - Mus musculus mRNA for phenol UDP-glucuronosyltransferase, complete cds.AY227196 - Mus musculus UDP glycosyltransferase 1 family polypeptide A5 (Ugt1a5) mRNA, complete cds.BC139093 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A5, mRNA (cDNA clone MGC:170720 IMAGE:8862115), complete cds.BC139094 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A5, mRNA (cDNA clone MGC:170721 IMAGE:8862116), complete cds.BC165969 - Synthetic construct Mus musculus clone IMAGE:100066269, MGC:195406 UDP glucuronosyltransferase 1 family, polypeptide A5 (Ugt1a5) mRNA, encodes complete protein.AB094481 - Mus musculus LE137 mRNA for hypothetical protein, complete cds, similar to Rat UGT1A5.AY227195 - Mus musculus UDP glycosyltransferase 1 family polypeptide A2 (Ugt1a2) mRNA, complete cds.AK002629 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610013P07 product:UDP-glucuronosyltransferase 1 family, member 1, full insert sequence.BC138676 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A2, mRNA (cDNA clone MGC:170302 IMAGE:8861697), complete cds.BC145969 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A2, mRNA (cDNA clone MGC:175856 IMAGE:40131272), complete cds.D87866 - Mus musculus mRNA for bilirubin UDP-glucuronosyltransferase, complete cds.AY227194 - Mus musculus UDP glycosyltransferase 1 family polypeptide A1 (Ugt1a1) mRNA, complete cds.LF192775 - JP 2014500723-A/278: Polycomb-Associated Non-Coding RNAs.L02333 - Murine bilirubin/phenol family UDP glucuronosyltransferase (ugtBr) mRNA sequence.S64760 - UGTBr1=UDP-glucuronosyltransferase [mice, mRNA, 2215 nt].BC093516 - Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A1, mRNA (cDNA clone MGC:103216 IMAGE:5135493), complete cds.JX026002 - Mus musculus strain C57BL/6J UDP glucuronosyltransferase 1 family polypeptide A1 (Ugt1a1) mRNA, complete cds, alternatively spliced.LF216945 - JP 2014500723-A/24448: Polycomb-Associated Non-Coding RNAs.LF216946 - JP 2014500723-A/24449: Polycomb-Associated Non-Coding RNAs.LF216948 - JP 2014500723-A/24451: Polycomb-Associated Non-Coding RNAs.LF216949 - JP 2014500723-A/24452: Polycomb-Associated Non-Coding RNAs.MA428352 - JP 2018138019-A/278: Polycomb-Associated Non-Coding RNAs.MA452522 - JP 2018138019-A/24448: Polycomb-Associated Non-Coding RNAs.MA452523 - JP 2018138019-A/24449: Polycomb-Associated Non-Coding RNAs.MA452525 - JP 2018138019-A/24451: Polycomb-Associated Non-Coding RNAs.MA452526 - JP 2018138019-A/24452: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
Other Names for This Gene
Alternate Gene Symbols: B2RT14, B2RT14_MOUSE, mCG_14318, NM_201643, uc007byh.1, uc007byh.2UCSC ID: uc007byh.2RefSeq Accession: NM_201643
Protein: B2RT14
CCDS: CCDS35659.1
Gene Model Information
Click here
for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
Click here
for details on how this gene model was made and data restrictions if any.