The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q9WVF5
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu04010 - MAPK signaling pathway mmu04012 - ErbB signaling pathway mmu04020 - Calcium signaling pathway mmu04060 - Cytokine-cytokine receptor interaction mmu04144 - Endocytosis mmu04320 - Dorso-ventral axis formation mmu04510 - Focal adhesion mmu04520 - Adherens junction mmu04540 - Gap junction mmu04810 - Regulation of actin cytoskeleton mmu04912 - GnRH signaling pathway mmu05160 - Hepatitis C mmu05200 - Pathways in cancer mmu05212 - Pancreatic cancer mmu05213 - Endometrial cancer mmu05214 - Glioma mmu05215 - Prostate cancer mmu05218 - Melanoma mmu05219 - Bladder cancer mmu05223 - Non-small cell lung cancer
BioCarta from NCI Cancer Genome Anatomy Project m_ErbB3Pathway - Neuroregulin receptor degredation protein-1 Controls ErbB3 receptor recycling m_telPathway - Telomeres, Telomerase, Cellular Aging, and Immortality m_tffPathway - Trefoil Factors Initiate Mucosal Healing m_cardiacegfPathway - Role of EGF Receptor Transactivation by GPCRs in Cardiac Hypertrophy m_keratinocytePathway - Keratinocyte Differentiation m_eea1Pathway - The role of FYVE-finger proteins in vesicle transport m_spryPathway - Sprouty regulation of tyrosine kinase signals m_egfPathway - EGF Signaling Pathway m_her2Pathway - Role of ERBB2 in Signal Transduction and Oncology m_agrPathway - Agrin in Postsynaptic Differentiation m_egfr_smrtePathway - Map Kinase Inactivation of SMRT Corepressor m_erkPathway - Erk1/Erk2 Mapk Signaling pathway m_At1rPathway - Angiotensin II mediated activation of JNK Pathway via Pyk2 dependent signaling m_cblPathway - CBL mediated ligand-induced downregulation of EGF receptors m_mCalpainPathway - mCalpain and friends in Cell motility