Mouse Gene Pdgfb (ENSMUST00000000500.7) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus platelet derived growth factor, B polypeptide (Pdgfb), mRNA. (from RefSeq NM_011057)
Gencode Transcript: ENSMUST00000000500.7
Gencode Gene: ENSMUSG00000000489.7
Transcript (Including UTRs)
Position: mm10 chr15:79,995,874-80,014,808 Size: 18,935 Total Exon Count: 7 Strand: -
Coding Region
Position: mm10 chr15:79,997,580-80,013,998 Size: 16,419 Coding Exon Count: 6
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BC036976 - Mus musculus platelet derived growth factor, B polypeptide, mRNA (cDNA clone IMAGE:4946092), partial cds.BC023427 - Mus musculus platelet derived growth factor, B polypeptide, mRNA (cDNA clone IMAGE:5010396), partial cds.BC064056 - Mus musculus platelet derived growth factor, B polypeptide, mRNA (cDNA clone MGC:73598 IMAGE:1380782), complete cds.BC053430 - Mus musculus platelet derived growth factor, B polypeptide, mRNA (cDNA clone MGC:59331 IMAGE:6330609), complete cds.AF162784 - Mus musculus platelet-derived growth factor beta chain (Pdgfb) mRNA, complete cds.AK087840 - Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330027M19 product:platelet derived growth factor, B polypeptide, full insert sequence.
Biochemical and Signaling Pathways
Other Names for This Gene
Alternate Gene Symbols: A0A0R4IZW4, NM_011057, uc007wuz.1, uc007wuz.2UCSC ID: uc007wuz.2RefSeq Accession: NM_011057
CCDS: CCDS27656.1
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.