Mouse Gene Mtch1 (ENSMUST00000095427.11) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus mitochondrial carrier 1 (Mtch1), transcript variant 1, mRNA. (from RefSeq NM_019880)
Gencode Transcript: ENSMUST00000095427.11
Gencode Gene: ENSMUSG00000024012.18
Transcript (Including UTRs)
Position: mm10 chr17:29,332,072-29,347,934 Size: 15,863 Total Exon Count: 12 Strand: -
Coding Region
Position: mm10 chr17:29,332,707-29,347,787 Size: 15,081 Coding Exon Count: 12
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: MTCH1_MOUSE
DESCRIPTION: RecName: Full=Mitochondrial carrier homolog 1; AltName: Full=Mitochondrial carrier-like protein 1;
FUNCTION: Potential mitochondrial transporter. May play a role in apoptosis (By similarity).SUBUNIT: Interacts with PSEN1 (By similarity).SUBCELLULAR LOCATION: Mitochondrion inner membrane; Multi-pass membrane protein (Potential).SIMILARITY: Belongs to the mitochondrial carrier family.SIMILARITY: Contains 2 Solcar repeats.SEQUENCE CAUTION: Sequence=AAH23135.1; Type=Erroneous initiation; Sequence=AAH26436.1; Type=Erroneous initiation; Sequence=AAH27274.1; Type=Erroneous initiation; Sequence=BAE32313.1; Type=Erroneous initiation;
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR018108 - Mitochondrial_sb/sol_carrier
IPR023395 - Mt_carrier_dom
Pfam Domains: PF00153 - Mitochondrial carrier protein
SCOP Domains: 103506 - Mitochondrial carrier
ModBase Predicted Comparative 3D Structure on Q791T5
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
AK196930 - Mus musculus cDNA, clone:Y1G0123H06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK212558 - Mus musculus cDNA, clone:Y2G0125F22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK179013 - Mus musculus cDNA, clone:Y0G0108M08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK191792 - Mus musculus cDNA, clone:Y1G0106P17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK191954 - Mus musculus cDNA, clone:Y1G0107H03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK192009 - Mus musculus cDNA, clone:Y1G0107J15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK192248 - Mus musculus cDNA, clone:Y1G0108F01, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK194435 - Mus musculus cDNA, clone:Y1G0115F07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK194668 - Mus musculus cDNA, clone:Y1G0116B13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK196870 - Mus musculus cDNA, clone:Y1G0123E08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK197332 - Mus musculus cDNA, clone:Y1G0124M08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK197534 - Mus musculus cDNA, clone:Y1G0125G07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK197964 - Mus musculus cDNA, clone:Y1G0126L07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK198564 - Mus musculus cDNA, clone:Y1G0128I11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK199530 - Mus musculus cDNA, clone:Y1G0131I06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK201056 - Mus musculus cDNA, clone:Y1G0136N08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK201539 - Mus musculus cDNA, clone:Y1G0138J03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK203000 - Mus musculus cDNA, clone:Y1G0143G16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK203399 - Mus musculus cDNA, clone:Y1G0144L22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK205452 - Mus musculus cDNA, clone:Y2G0101L17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK206098 - Mus musculus cDNA, clone:Y2G0103L21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK206512 - Mus musculus cDNA, clone:Y2G0105B19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK206937 - Mus musculus cDNA, clone:Y2G0106G18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK207126 - Mus musculus cDNA, clone:Y2G0107A06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK207230 - Mus musculus cDNA, clone:Y2G0107F15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK208701 - Mus musculus cDNA, clone:Y2G0112H16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK208828 - Mus musculus cDNA, clone:Y2G0112O05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209213 - Mus musculus cDNA, clone:Y2G0114F15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209789 - Mus musculus cDNA, clone:Y2G0116E03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209981 - Mus musculus cDNA, clone:Y2G0116P08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK210285 - Mus musculus cDNA, clone:Y2G0117O07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK213297 - Mus musculus cDNA, clone:Y2G0127O05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK214524 - Mus musculus cDNA, clone:Y2G0132A22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK215059 - Mus musculus cDNA, clone:Y2G0133N10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK215190 - Mus musculus cDNA, clone:Y2G0134E06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK216129 - Mus musculus cDNA, clone:Y2G0137E22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK218222 - Mus musculus cDNA, clone:Y2G0144H02, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK220070 - Mus musculus cDNA, clone:Y2G0150K23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK220129 - Mus musculus cDNA, clone:Y2G0150O11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK207522 - Mus musculus cDNA, clone:Y2G0108E16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK212498 - Mus musculus cDNA, clone:Y2G0125C14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK199020 - Mus musculus cDNA, clone:Y1G0129O04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK200252 - Mus musculus cDNA, clone:Y1G0133P07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK205205 - Mus musculus cDNA, clone:Y1G0150P12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK189748 - Mus musculus cDNA, clone:Y0G0150F18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209850 - Mus musculus cDNA, clone:Y2G0116H23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK216414 - Mus musculus cDNA, clone:Y2G0138E17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.BC029723 - Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone IMAGE:5035572), with apparent retained intron.BC026436 - Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone IMAGE:4238223), complete cds.BC023135 - Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone MGC:29052 IMAGE:3669288), complete cds.BC027274 - Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone MGC:29012 IMAGE:3156729), complete cds.AF176007 - Mus musculus domesticus mitochondrial carrier homolog 1 isoform a mRNA, complete cds; nuclear gene for mitochondrial product.AF192558 - Mus musculus domesticus mitochondrial carrier homolog 1 isoform b (Mtch1) mRNA, complete cds; nuclear gene for mitochondrial product.AK209427 - Mus musculus cDNA, clone:Y2G0115B12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK195206 - Mus musculus cDNA, clone:Y1G0117L12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK196523 - Mus musculus cDNA, clone:Y1G0122B17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK182222 - Mus musculus cDNA, clone:Y0G0121D22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK198074 - Mus musculus cDNA, clone:Y1G0127A19, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK199558 - Mus musculus cDNA, clone:Y1G0131J23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK201212 - Mus musculus cDNA, clone:Y1G0137H05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK201278 - Mus musculus cDNA, clone:Y1G0137L12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK207280 - Mus musculus cDNA, clone:Y2G0107I06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK211746 - Mus musculus cDNA, clone:Y2G0122L18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK217409 - Mus musculus cDNA, clone:Y2G0141L04, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK218238 - Mus musculus cDNA, clone:Y2G0144H23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK189633 - Mus musculus cDNA, clone:Y0G0149N08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK154010 - Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021P15 product:mitochondrial carrier homolog 1 (C. elegans), full insert sequence.AK197105 - Mus musculus cDNA, clone:Y1G0124A11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK199094 - Mus musculus cDNA, clone:Y1G0130C11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209577 - Mus musculus cDNA, clone:Y2G0115I18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK009623 - Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310034O17 product:mitochondrial carrier homolog 1, full insert sequence.AK205989 - Mus musculus cDNA, clone:Y2G0103G16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK211639 - Mus musculus cDNA, clone:Y2G0122G08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK215161 - Mus musculus cDNA, clone:Y2G0134C19, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK181789 - Mus musculus cDNA, clone:Y0G0119H02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK209530 - Mus musculus cDNA, clone:Y2G0115G12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK198904 - Mus musculus cDNA, clone:Y1G0129I10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK192482 - Mus musculus cDNA, clone:Y1G0109A14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK181306 - Mus musculus cDNA, clone:Y0G0117K10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK183305 - Mus musculus cDNA, clone:Y0G0125G21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK177855 - Mus musculus cDNA, clone:Y0G0104I03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK180125 - Mus musculus cDNA, clone:Y0G0113A07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK180246 - Mus musculus cDNA, clone:Y0G0113H03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK180411 - Mus musculus cDNA, clone:Y0G0114C08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK183042 - Mus musculus cDNA, clone:Y0G0124I17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK183044 - Mus musculus cDNA, clone:Y0G0124I19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK186474 - Mus musculus cDNA, clone:Y0G0137H07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK202643 - Mus musculus cDNA, clone:Y1G0142E10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK181825 - Mus musculus cDNA, clone:Y0G0119J10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK179349 - Mus musculus cDNA, clone:Y0G0110A21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK217311 - Mus musculus cDNA, clone:Y2G0141F24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK178236 - Mus musculus cDNA, clone:Y0G0105O20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK189389 - Mus musculus cDNA, clone:Y0G0149A07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK210039 - Mus musculus cDNA, clone:Y2G0117C06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK207873 - Mus musculus cDNA, clone:Y2G0109G09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK214576 - Mus musculus cDNA, clone:Y2G0132D17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK200271 - Mus musculus cDNA, clone:Y1G0134A07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK178745 - Mus musculus cDNA, clone:Y0G0107M07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK178762 - Mus musculus cDNA, clone:Y0G0107N03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK183124 - Mus musculus cDNA, clone:Y0G0124M16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK188675 - Mus musculus cDNA, clone:Y0G0146C05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK195241 - Mus musculus cDNA, clone:Y1G0117N05, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK199429 - Mus musculus cDNA, clone:Y1G0131C24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK201694 - Mus musculus cDNA, clone:Y1G0139B03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK208166 - Mus musculus cDNA, clone:Y2G0110F06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK208213 - Mus musculus cDNA, clone:Y2G0110H11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK219508 - Mus musculus cDNA, clone:Y2G0148L02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK206400 - Mus musculus cDNA, clone:Y2G0104L18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK193036 - Mus musculus cDNA, clone:Y1G0110M16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.AK217430 - Mus musculus cDNA, clone:Y2G0141M04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000024809, based on BLAT search.
Other Names for This Gene
Alternate Gene Symbols: MTCH1_MOUSE, NM_019880, Q3U4W7, Q791T5, Q791V6, Q8R0T0, Q8R1T8, Q8R2T2, Q9QZA5, Q9QZP4, uc008bst.1, uc008bst.2UCSC ID: uc008bst.2RefSeq Accession: NM_019880
Protein: Q791T5
(aka MTCH1_MOUSE)
CCDS: CCDS28596.1 , CCDS84288.1
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.