The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q540I4
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Biological Process: GO:0001765 membrane raft assembly GO:0001819 positive regulation of cytokine production GO:0001934 positive regulation of protein phosphorylation GO:0002090 regulation of receptor internalization GO:0007409 axonogenesis GO:0022617 extracellular matrix disassembly GO:0032092 positive regulation of protein binding GO:0032226 positive regulation of synaptic transmission, dopaminergic GO:0032728 positive regulation of interferon-beta production GO:0033227 dsRNA transport GO:0034116 positive regulation of heterotypic cell-cell adhesion GO:0034141 positive regulation of toll-like receptor 3 signaling pathway GO:0034976 response to endoplasmic reticulum stress GO:0035023 regulation of Rho protein signal transduction GO:0044854 plasma membrane raft assembly GO:0045807 positive regulation of endocytosis GO:0048643 positive regulation of skeletal muscle tissue development GO:0050821 protein stabilization GO:0051260 protein homooligomerization GO:0060355 positive regulation of cell adhesion molecule production GO:0070528 protein kinase C signaling GO:0071360 cellular response to exogenous dsRNA GO:0072659 protein localization to plasma membrane GO:1901741 positive regulation of myoblast fusion GO:1901890 positive regulation of cell junction assembly GO:1903044 protein localization to membrane raft GO:2000049 positive regulation of cell-cell adhesion mediated by cadherin
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