Mouse Gene Slc22a7 (ENSMUST00000087012.6) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus solute carrier family 22 (organic anion transporter), member 7 (Slc22a7), mRNA. (from RefSeq NM_144856)
Gencode Transcript: ENSMUST00000087012.6
Gencode Gene: ENSMUSG00000067144.7
Transcript (Including UTRs)
Position: mm10 chr17:46,432,183-46,438,457 Size: 6,275 Total Exon Count: 10 Strand: -
Coding Region
Position: mm10 chr17:46,432,481-46,438,389 Size: 5,909 Coding Exon Count: 10
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BC026597 - Mus musculus solute carrier family 22 (organic anion transporter), member 7, mRNA (cDNA clone MGC:37316 IMAGE:4975360), complete cds.AK143949 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530004K04 product:solute carrier family 22 (organic anion transporter), member 7, full insert sequence.BC025813 - Mus musculus solute carrier family 22 (organic anion transporter), member 7, mRNA (cDNA clone MGC:37791 IMAGE:5097639), complete cds.AK082865 - Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330046A19 product:LIVER-SPECIFIC TRANSPORT PROTEIN homolog [Rattus norvegicus], full insert sequence.BC026598 - Mus musculus solute carrier family 22 (organic anion transporter), member 7, mRNA (cDNA clone MGC:37327 IMAGE:4975598), complete cds.BC013474 - Mus musculus solute carrier family 22 (organic anion transporter), member 7, mRNA (cDNA clone MGC:18877 IMAGE:4236556), complete cds.BC024119 - Mus musculus solute carrier family 22 (organic anion transporter), member 7, mRNA (cDNA clone MGC:37764 IMAGE:5096875), complete cds.AB069965 - Mus musculus SLC22A7 mRNA for organic anion transporter 2, complete cds.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu04976 - Bile secretion
Other Names for This Gene
Alternate Gene Symbols: A0A0R4J122, NM_144856, uc008csw.1, uc008csw.2, uc008csw.3UCSC ID: uc008csw.3RefSeq Accession: NM_144856
CCDS: CCDS28829.1
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.