Mouse Gene Cndp1 (ENSMUST00000070139.8) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus carnosine dipeptidase 1 (metallopeptidase M20 family) (Cndp1), mRNA. (from RefSeq NM_177450)
Gencode Transcript: ENSMUST00000070139.8
Gencode Gene: ENSMUSG00000056162.14
Transcript (Including UTRs)
Position: mm10 chr18:84,610,509-84,650,095 Size: 39,587 Total Exon Count: 12 Strand: -
Coding Region
Position: mm10 chr18:84,611,588-84,640,278 Size: 28,691 Coding Exon Count: 11
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BC043305 - Mus musculus carnosine dipeptidase 1 (metallopeptidase M20 family), mRNA (cDNA clone MGC:49227 IMAGE:5040944), complete cds.AK085308 - Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630009N02 product:similar to GLUTAMATE CARBOXYPEPTIDASE-LIKE PROTEIN 2 [Homo sapiens], full insert sequence.AK162089 - Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420406L11 product:carnosine dipeptidase 1 (metallopeptidase M20 family), full insert sequence.AK165706 - Mus musculus adult male intestinal mucosa cDNA, RIKEN full-length enriched library, clone:G630007G19 product:carnosine dipeptidase 1 (metallopeptidase M20 family), full insert sequence.AK165500 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530205H05 product:carnosine dipeptidase 1 (metallopeptidase M20 family), full insert sequence.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu00340 - Histidine metabolismmmu00410 - beta-Alanine metabolismmmu01100 - Metabolic pathways
Other Names for This Gene
Alternate Gene Symbols: A0A0R4J0V0, NM_177450, uc008fur.1, uc008fur.2, uc008fur.3, uc008fur.4UCSC ID: uc008fur.4RefSeq Accession: NM_177450
CCDS: CCDS29382.1
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.