Mouse Gene Sufu (ENSMUST00000120778.7) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Sufu (from geneSymbol)
Gencode Transcript: ENSMUST00000120778.7
Gencode Gene: ENSMUSG00000025231.17
Transcript (Including UTRs)
Position: mm10 chr19:46,397,004-46,455,707 Size: 58,704 Total Exon Count: 7 Strand: +
Coding Region
Position: mm10 chr19:46,397,103-46,454,850 Size: 57,748 Coding Exon Count: 7
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AJ131692 - Mus musculus mRNA for Su(fu) protein (Suppressor of fused gene), partial.AK016976 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933429A17 product:suppressor of fused homolog (Drosophila), full insert sequence.BC048168 - Mus musculus suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:61295 IMAGE:6821477), complete cds.BC056997 - Mus musculus suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:66978 IMAGE:6821477), complete cds.AK156410 - Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830020M15 product:suppressor of fused homolog (Drosophila), full insert sequence.AF134893 - Mus musculus suppressor of fused (Sufu) mRNA, complete cds.AJ308626 - Mus musculus mRNA for suppressor of fused homolog (Drosophila) (Sufu gene), clone IMAGE:1195307.AK015885 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930524I10 product:suppressor of fused homolog (Drosophila), full insert sequence.AK047603 - Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930097H22 product:suppressor of fused homolog (Drosophila), full insert sequence.AJ308625 - Mus musculus partial mRNA for suppressor of fused homolog (Drosophila) (Sufu gene), clone IMAGE:513730.AK208852 - Mus musculus cDNA, clone:Y2G0112P15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026261, based on BLAT search.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu04340 - Hedgehog signaling pathwaymmu05200 - Pathways in cancermmu05217 - Basal cell carcinoma
BioCarta from NCI Cancer Genome Anatomy Project m_shhPathway - Sonic Hedgehog (Shh) Pathway
Other Names for This Gene
Alternate Gene Symbols: A0A0R4J1M0, AK015885, uc008htn.1, uc008htn.2, uc008htn.3UCSC ID: uc008htn.3RefSeq Accession: NM_015752
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.