Mouse Gene Ddah1 (ENSMUST00000029845.14) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Mus musculus dimethylarginine dimethylaminohydrolase 1 (Ddah1), mRNA. (from RefSeq NM_026993)
Gencode Transcript: ENSMUST00000029845.14
Gencode Gene: ENSMUSG00000028194.15
Transcript (Including UTRs)
   Position: mm10 chr3:145,758,675-145,894,277 Size: 135,603 Total Exon Count: 6 Strand: +
Coding Region
   Position: mm10 chr3:145,758,862-145,891,558 Size: 132,697 Coding Exon Count: 6 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDRNA Structure
Protein StructureOther SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther Names
Model InformationMethods
Data last updated at UCSC: 2019-09-19

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:145,758,675-145,894,277)mRNA (may differ from genome)Protein (285 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsMGI
PubMedReactomeSOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: DDAH1_MOUSE
DESCRIPTION: RecName: Full=N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; Short=DDAH-1; Short=Dimethylarginine dimethylaminohydrolase 1; EC=3.5.3.18; AltName: Full=DDAHI; AltName: Full=Dimethylargininase-1;
FUNCTION: Hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA) which act as inhibitors of NOS. Has therefore a role in the regulation of nitric oxide generation.
CATALYTIC ACTIVITY: N(omega),N(omega)-dimethyl-L-arginine + H(2)O = dimethylamine + L-citrulline.
ENZYME REGULATION: Inhibited by zinc ions (By similarity).
SUBUNIT: Monomer (By similarity).
TISSUE SPECIFICITY: Detected in skeletal muscle, lung, heart and brain (at protein level). Detected in liver, kidney and lung.
DISRUPTION PHENOTYPE: Death at embryonic stages. Heterozygous mice show no visible phenotype, but have higher than normal tissue and plasma levels of asymmetric dimethylarginine (ADMA). They have increased mean arterial blood pressure and systemic vascular resistance, and decreased cardiac output and heart rate, probably due to reduced levels of nitric oxide (NO).
SIMILARITY: Belongs to the DDAH family.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -87.40187-0.467 Picture PostScript Text
3' UTR -742.122719-0.273 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR003198 - Amidino_trans

Pfam Domains:
PF02274 - Amidinotransferase

SCOP Domains:
55909 - Pentein

ModBase Predicted Comparative 3D Structure on Q9CWS0
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologGenome BrowserNo orthologNo ortholog
Gene Details     
Gene Sorter     
GenBankRGD Ensembl  
Protein SequenceProtein Sequence Protein Sequence  
AlignmentAlignment Alignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0008270 zinc ion binding
GO:0016403 dimethylargininase activity
GO:0016597 amino acid binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding

Biological Process:
GO:0000052 citrulline metabolic process
GO:0003073 regulation of systemic arterial blood pressure
GO:0006525 arginine metabolic process
GO:0006527 arginine catabolic process
GO:0006809 nitric oxide biosynthetic process
GO:0008285 negative regulation of cell proliferation
GO:0017014 protein nitrosylation
GO:0043116 negative regulation of vascular permeability
GO:0045429 positive regulation of nitric oxide biosynthetic process
GO:0045766 positive regulation of angiogenesis
GO:1900038 negative regulation of cellular response to hypoxia

Cellular Component:
GO:0005739 mitochondrion


-  Descriptions from all associated GenBank mRNAs
  AK143507 - Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860038F15 product:dimethylarginine dimethylaminohydrolase 1, full insert sequence.
AK148907 - Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120461O18 product:dimethylarginine dimethylaminohydrolase 1, full insert sequence.
AK010430 - Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410006N07 product:dimethylarginine dimethylaminohydrolase 1, full insert sequence.
BC034505 - Mus musculus dimethylarginine dimethylaminohydrolase 1, mRNA (cDNA clone MGC:30267 IMAGE:5134831), complete cds.
AK149185 - Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120491N07 product:dimethylarginine dimethylaminohydrolase 1, full insert sequence.
AK128909 - Mus musculus cDNA fis, clone TRACH2023479, highly similar to NG,NG-DIMETHYLARGININE DIMETHYLAMINOHYDROLASE 1 (EC 3.5.3.18).
BC060266 - Mus musculus dimethylarginine dimethylaminohydrolase 1, mRNA (cDNA clone IMAGE:5698949), **** WARNING: chimeric clone ****.
AK179172 - Mus musculus cDNA, clone:Y0G0109G03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000029845, based on BLAT search.
AK034396 - Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330186E03 product:unclassifiable, full insert sequence.
AK010970 - Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015N06 product:unclassifiable, full insert sequence.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q9CWS0 (Reactome details) participates in the following event(s):

R-MMU-5693373 DDAH1,2 hydrolyses ADMA to DMA and L-Cit
R-MMU-203615 eNOS activation
R-MMU-203765 eNOS activation and regulation
R-MMU-202131 Metabolism of nitric oxide
R-MMU-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: DDAH1_MOUSE, NM_026993, Q3UF65, Q9CWS0, uc008rqr.1, uc008rqr.2, uc008rqr.3
UCSC ID: uc008rqr.3
RefSeq Accession: NM_026993
Protein: Q9CWS0 (aka DDAH1_MOUSE or DDH1_MOUSE)
CCDS: CCDS17896.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.