Mouse Gene Plin2 (ENSMUST00000000466.12) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus perilipin 2 (Plin2), mRNA. (from RefSeq NM_007408)
Gencode Transcript: ENSMUST00000000466.12
Gencode Gene: ENSMUSG00000028494.12
Transcript (Including UTRs)
Position: mm10 chr4:86,656,565-86,670,060 Size: 13,496 Total Exon Count: 8 Strand: -
Coding Region
Position: mm10 chr4:86,657,033-86,668,679 Size: 11,647 Coding Exon Count: 7
Data last updated at UCSC: 2019-09-19
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: PLIN2_MOUSE
DESCRIPTION: RecName: Full=Perilipin-2; AltName: Full=Adipophilin; AltName: Full=Adipose differentiation-related protein; Short=ADRP;
FUNCTION: May be involved in development and maintenance of adipose tissue.SUBCELLULAR LOCATION: Membrane; Peripheral membrane protein.TISSUE SPECIFICITY: Adipose tissue specific. Expressed abundantly and preferentially in fat pads.INDUCTION: By dexamethasone.SIMILARITY: Belongs to the perilipin family.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR004279 - Perilipin
Pfam Domains: PF03036 - Perilipin family
SCOP Domains: 109775 - Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
ModBase Predicted Comparative 3D Structure on P43883
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Descriptions from all associated GenBank mRNAs
AK152877 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089E01 product:adipose differentiation related protein, full insert sequence.AK011014 - Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510028E23 product:adipose differentiation related protein, full insert sequence.AK090277 - Mus musculus adult male gall bladder cDNA, RIKEN full-length enriched library, clone:G630033C11 product:adipose differentiation related protein, full insert sequence.AK002911 - Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610042H15 product:adipose differentiation related protein, full insert sequence.AK154582 - Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630049D05 product:adipose differentiation related protein, full insert sequence.AK152081 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047F06 product:adipose differentiation related protein, full insert sequence.AK152896 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089J21 product:adipose differentiation related protein, full insert sequence.BC047124 - Mus musculus adipose differentiation related protein, mRNA (cDNA clone IMAGE:5027325).AK152263 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830057L15 product:adipose differentiation related protein, full insert sequence.AK152982 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830097K16 product:adipose differentiation related protein, full insert sequence.BC054766 - Mus musculus adipose differentiation related protein, mRNA (cDNA clone MGC:64802 IMAGE:6414796), complete cds.AK153222 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830128C06 product:adipose differentiation related protein, full insert sequence.AK078967 - Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130414H03 product:adipose differentiation related protein, full insert sequence.AK150177 - Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530141O19 product:adipose differentiation related protein, full insert sequence.AK167140 - Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0033N08 product:adipose differentiation related protein, full insert sequence.M93275 - Mouse adipose differentiation related protein (ADFP) mRNA, complete cds.AK181873 - Mus musculus cDNA, clone:Y0G0119N13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.AK188078 - Mus musculus cDNA, clone:Y0G0144A05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.LF194467 - JP 2014500723-A/1970: Polycomb-Associated Non-Coding RNAs.AY035850 - Mus musculus C57BL/6J adipose differentiation-related protein mRNA, complete cds.AY035851 - Mus musculus DBA/2J adipose differentiation-related protein mRNA, complete cds.LF273118 - JP 2014500723-A/80621: Polycomb-Associated Non-Coding RNAs.LF273119 - JP 2014500723-A/80622: Polycomb-Associated Non-Coding RNAs.AK181807 - Mus musculus cDNA, clone:Y0G0119I05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.AK192865 - Mus musculus cDNA, clone:Y1G0110D06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.AK206949 - Mus musculus cDNA, clone:Y2G0106H11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.AK186811 - Mus musculus cDNA, clone:Y0G0138N08, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.AK179029 - Mus musculus cDNA, clone:Y0G0108N16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000000466, based on BLAT search.MA430044 - JP 2018138019-A/1970: Polycomb-Associated Non-Coding RNAs.MA508695 - JP 2018138019-A/80621: Polycomb-Associated Non-Coding RNAs.MA508696 - JP 2018138019-A/80622: Polycomb-Associated Non-Coding RNAs.
Other Names for This Gene
Alternate Gene Symbols: Adfp, Adrp, NM_007408, P43883, PLIN2_MOUSE, Q8K3Q8, uc008tlz.1, uc008tlz.2UCSC ID: uc008tlz.2RefSeq Accession: NM_007408
Protein: P43883
(aka PLIN2_MOUSE)
CCDS: CCDS18308.1
Gene Model Information
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Methods, Credits, and Use Restrictions
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