The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Pfam Domains: PF03901 - Alg9-like mannosyltransferase family
ModBase Predicted Comparative 3D Structure on Q8VDI9
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
AK086674 - Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930045C02 product:SIMILAR TO DISRUPTED IN BIPOLAR DISORDER 1 homolog [Mus musculus], full insert sequence. AK050335 - Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730038F19 product:DIBD1 homolog [Homo sapiens], full insert sequence. AK149592 - Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730048I12 product:disrupted in bipolar disorder 1 homolog (human), full insert sequence. AK054293 - Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330011F20 product:SIMILAR TO DISRUPTED IN BIPOLAR DISORDER 1 homolog [Mus musculus], full insert sequence. BC021791 - Mus musculus asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase), mRNA (cDNA clone MGC:28731 IMAGE:4459738), complete cds. AK214709 - Mus musculus cDNA, clone:Y2G0132L14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000034561, based on BLAT search. AK212096 - Mus musculus cDNA, clone:Y2G0123N14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000034561, based on BLAT search. AK189486 - Mus musculus cDNA, clone:Y0G0149F14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000034561, based on BLAT search. LF197591 - JP 2014500723-A/5094: Polycomb-Associated Non-Coding RNAs. LF307008 - JP 2014500723-A/114511: Polycomb-Associated Non-Coding RNAs. AK020231 - Mus musculus 15 days embryo embryonic body below diaphragm cDNA, RIKEN full-length enriched library, clone:8230402H15 product:DIBD1 homolog [Homo sapiens], full insert sequence. AK201582 - Mus musculus cDNA, clone:Y1G0138L04, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000034561, based on BLAT search. MA433168 - JP 2018138019-A/5094: Polycomb-Associated Non-Coding RNAs. MA542585 - JP 2018138019-A/114511: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu00510 - N-Glycan biosynthesis mmu01100 - Metabolic pathways
Reactome (by CSHL, EBI, and GO)
Protein Q8VDI9 (Reactome details) participates in the following event(s):
R-MMU-446215 ALG9 transfers Man to N-glycan precursor (GlcNAc)2 (Man)6 (PP-Dol)1 R-MMU-446216 ALG9 transfers Man to N-glycan precursor (GlcNAc)2 (Man)8 (PP-Dol)1 R-MMU-446193 Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein R-MMU-446203 Asparagine N-linked glycosylation R-MMU-597592 Post-translational protein modification R-MMU-392499 Metabolism of proteins
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