Human Gene ZNF470 (uc010etn.3) Description and Page Index
  Description: Homo sapiens zinc finger protein 470 (ZNF470), mRNA.
Transcript (Including UTRs)
   Position: hg19 chr19:57,078,890-57,100,278 Size: 21,389 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksMalaCardsCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:57,078,890-57,100,278)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblExonPrimerGeneNetworkHGNCLynx
PubMedStanford SOURCETreefam

-  MalaCards Disease Associations
  MalaCards Gene Search: ZNF470
Diseases sorted by gene-association score: amyotrophic lateral sclerosis 1 (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.64 RPKM in Brain - Cerebellar Hemisphere
Total median expression: 57.60 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC142627 - Homo sapiens cDNA clone IMAGE:40147494.
DQ587992 - Homo sapiens piRNA piR-55104, complete sequence.
BC150188 - Homo sapiens cDNA clone IMAGE:40148471.
AY484591 - Homo sapiens zinc finger protein 470 (ZNF470) mRNA, complete cds.
BC136762 - Homo sapiens zinc finger protein 470, mRNA (cDNA clone MGC:168375 IMAGE:9020752), complete cds.
AK130356 - Homo sapiens cDNA FLJ26846 fis, clone PRS07909.

-  Other Names for This Gene
  Alternate Gene Symbols: BC150188
UCSC ID: uc010etn.3
RefSeq Accession: NM_001001668

-  Gene Model Information
 
category: nearCoding nonsense-mediated-decay: no RNA accession: BC150188.1
exon count: 6CDS single in 3' UTR: no RNA size: 1516
ORF size: 0CDS single in intron: no Alignment % ID: 99.53
txCdsPredict score: 514.50frame shift in genome: no % Coverage: 97.49
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.