Human Gene LINC00299 (uc010eww.2) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 299 (LINC00299), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr2:8,147,901-8,468,549 Size: 320,649 Total Exon Count: 9 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:8,147,901-8,468,549)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerH-INVHGNC
LynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.62 RPKM in Brain - Caudate (basal ganglia)
Total median expression: 7.01 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC043563 - Homo sapiens hypothetical protein LOC339789, mRNA (cDNA clone IMAGE:5211629), partial cds.
AK127578 - Homo sapiens cDNA FLJ45673 fis, clone D9OST2003989.
JD369885 - Sequence 350909 from Patent EP1572962.
JD063942 - Sequence 44966 from Patent EP1572962.
JD420930 - Sequence 401954 from Patent EP1572962.
JD457833 - Sequence 438857 from Patent EP1572962.
JD515789 - Sequence 496813 from Patent EP1572962.
JD444316 - Sequence 425340 from Patent EP1572962.
JD361679 - Sequence 342703 from Patent EP1572962.
JD303820 - Sequence 284844 from Patent EP1572962.
JD286336 - Sequence 267360 from Patent EP1572962.
JD256228 - Sequence 237252 from Patent EP1572962.
JD114059 - Sequence 95083 from Patent EP1572962.
JD206580 - Sequence 187604 from Patent EP1572962.
JD547367 - Sequence 528391 from Patent EP1572962.
JD560479 - Sequence 541503 from Patent EP1572962.
JD111210 - Sequence 92234 from Patent EP1572962.
JD292078 - Sequence 273102 from Patent EP1572962.
JD045131 - Sequence 26155 from Patent EP1572962.
JD171209 - Sequence 152233 from Patent EP1572962.
JD038332 - Sequence 19356 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_034135
UCSC ID: uc010eww.2
RefSeq Accession: NR_034135

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_034135.1
exon count: 9CDS single in 3' UTR: no RNA size: 2000
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 17.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.