Human Gene C16orf85 (uc010vox.1) Description and Page Index
  Description: RecName: Full=Putative uncharacterized protein C16orf85;
Transcript (Including UTRs)
   Position: hg19 chr16:88,620,185-88,633,125 Size: 12,941 Total Exon Count: 2 Strand: -
Coding Region
   Position: hg19 chr16:88,620,186-88,633,125 Size: 12,940 Coding Exon Count: 2 

Page IndexSequence and LinksGene AllelesProtein StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:88,620,185-88,633,125)mRNA (may differ from genome)Protein (147 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPExonPrimer
GeneCardsH-INVMGIPubMedStanford SOURCEUniProtKB

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  Protein Domain and Structure Information
  ModBase Predicted Comparative 3D Structure on Q6ZSH3
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK127438 - Homo sapiens cDNA FLJ45530 fis, clone BRTHA2028297.
BC148581 - Synthetic construct Homo sapiens clone IMAGE:100015491, MGC:183059 chromosome 16 open reading frame 85 (C16orf85) mRNA, encodes complete protein.
BC153153 - Synthetic construct Homo sapiens clone IMAGE:100016499, MGC:184323 chromosome 16 open reading frame 85 (C16orf85) mRNA, encodes complete protein.
AB463769 - Synthetic construct DNA, clone: pF1KB7439, Homo sapiens LOC400555 gene, without stop codon, in Flexi system.

-  Other Names for This Gene
  Alternate Gene Symbols: AB463769, CP085_HUMAN, Q6ZSH3
UCSC ID: uc010vox.1
Representative RNA: AB463769
Protein: Q6ZSH3 (aka CP085_HUMAN)

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: AB463769.1
exon count: 2CDS single in 3' UTR: no RNA size: 458
ORF size: 444CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 724.00frame shift in genome: no % Coverage: 96.29
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.