Human Gene PRPSAP1 (ENST00000324684.8) from GENCODE V44
Description: Homo sapiens phosphoribosyl pyrophosphate synthetase associated protein 1 (PRPSAP1), transcript variant 3, mRNA. (from RefSeq NM_001366236)
Gencode Transcript: ENST00000324684.8
Gencode Gene: ENSG00000161542.17
Transcript (Including UTRs)
Position: hg38 chr17:76,310,934-76,354,198 Size: 43,265 Total Exon Count: 10 Strand: -
Coding Region
Position: hg38 chr17:76,311,542-76,332,416 Size: 20,875 Coding Exon Count: 7
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR005946 - Rib-P_diPkinase
ModBase Predicted Comparative 3D Structure on B4DP31
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Molecular Function: GO:0000287 magnesium ion binding
GO:0004749 ribose phosphate diphosphokinase activity
Biological Process: GO:0009116 nucleoside metabolic process
GO:0009165 nucleotide biosynthetic process
Descriptions from all associated GenBank mRNAs
BC009012 - Homo sapiens phosphoribosyl pyrophosphate synthetase-associated protein 1, mRNA (cDNA clone MGC:17110 IMAGE:4186365), complete cds.AK131332 - Homo sapiens cDNA FLJ16342 fis, clone TESTI2015626, highly similar to Human mRNA for phosphoribosypyrophosphate synthetase-associated protein 39.D61391 - Homo sapiens mRNA for phosphoribosypyrophosphate synthetase-associated protein 39, complete cds.JD183354 - Sequence 164378 from Patent EP1572962.JD507288 - Sequence 488312 from Patent EP1572962.JD235471 - Sequence 216495 from Patent EP1572962.JD268072 - Sequence 249096 from Patent EP1572962.AK298171 - Homo sapiens cDNA FLJ57408 complete cds, highly similar to Phosphoribosyl pyrophosphatesynthetase-associated protein 1.JD488162 - Sequence 469186 from Patent EP1572962.JD219753 - Sequence 200777 from Patent EP1572962.JD040421 - Sequence 21445 from Patent EP1572962.JD434318 - Sequence 415342 from Patent EP1572962.AK312637 - Homo sapiens cDNA, FLJ93021, highly similar to Homo sapiens phosphoribosyl pyrophosphate synthetase-associated protein 1 (PRPSAP1), mRNA.HQ448273 - Synthetic construct Homo sapiens clone IMAGE:100071676; CCSB002821_01 phosphoribosyl pyrophosphate synthetase-associated protein 1 (PRPSAP1) gene, encodes complete protein.KJ901666 - Synthetic construct Homo sapiens clone ccsbBroadEn_11060 PRPSAP1 gene, encodes complete protein.AK092626 - Homo sapiens cDNA FLJ35307 fis, clone PROST2009901.CU679229 - Synthetic construct Homo sapiens gateway clone IMAGE:100017083 5' read PRPSAP1 mRNA.
Other Names for This Gene
Alternate Gene Symbols: B4DP31, B4DP31_HUMAN, ENST00000324684.1, ENST00000324684.2, ENST00000324684.3, ENST00000324684.4, ENST00000324684.5, ENST00000324684.6, ENST00000324684.7, NM_001366236, uc010wtb.1, uc010wtb.2UCSC ID: ENST00000324684.8RefSeq Accession: NM_001366236
Protein: B4DP31
CCDS: CCDS82209.1
Methods, Credits, and Use Restrictions
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