Human Gene FAM83F (ENST00000333407.11) from GENCODE V44
Description: Homo sapiens family with sequence similarity 83 member F (FAM83F), mRNA. (from RefSeq NM_138435)
Gencode Transcript: ENST00000333407.11
Gencode Gene: ENSG00000133477.17
Transcript (Including UTRs)
Position: hg38 chr22:39,994,954-40,043,534 Size: 48,581 Total Exon Count: 5 Strand: +
Coding Region
Position: hg38 chr22:39,995,043-40,029,565 Size: 34,523 Coding Exon Count: 5
Data last updated at UCSC: 2023-08-18 00:09:47
Sequence and Links to Tools and Databases
Comments and Description Text from UniProtKB
ID: FA83F_HUMAN
DESCRIPTION: RecName: Full=Protein FAM83F;
SIMILARITY: Belongs to the FAM83 family.
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
The following chemicals interact with this gene
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
InterPro Domains: Graphical view of domain structure IPR012461 - DUF1669
Pfam Domains: PF07894 - Protein of unknown function (DUF1669)
ModBase Predicted Comparative 3D Structure on Q8NEG4
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
BC031099 - Homo sapiens family with sequence similarity 83, member F, mRNA (cDNA clone MGC:33937 IMAGE:5296483), complete cds.KJ905596 - Synthetic construct Homo sapiens clone ccsbBroadEn_15222 FAM83F gene, encodes complete protein.AK311584 - Homo sapiens cDNA, FLJ18626.BC011204 - Homo sapiens family with sequence similarity 83, member F, mRNA (cDNA clone MGC:17507 IMAGE:3455576), complete cds.KJ903633 - Synthetic construct Homo sapiens clone ccsbBroadEn_13027 FAM83F gene, encodes complete protein.JD282674 - Sequence 263698 from Patent EP1572962.JD274157 - Sequence 255181 from Patent EP1572962.JD207187 - Sequence 188211 from Patent EP1572962.JD422787 - Sequence 403811 from Patent EP1572962.JD443904 - Sequence 424928 from Patent EP1572962.JD453566 - Sequence 434590 from Patent EP1572962.JD248137 - Sequence 229161 from Patent EP1572962.JD156217 - Sequence 137241 from Patent EP1572962.JD535465 - Sequence 516489 from Patent EP1572962.JD219622 - Sequence 200646 from Patent EP1572962.JD219623 - Sequence 200647 from Patent EP1572962.JD073028 - Sequence 54052 from Patent EP1572962.JD218968 - Sequence 199992 from Patent EP1572962.JD474902 - Sequence 455926 from Patent EP1572962.JD338700 - Sequence 319724 from Patent EP1572962.JD500258 - Sequence 481282 from Patent EP1572962.JD366869 - Sequence 347893 from Patent EP1572962.DQ580828 - Homo sapiens piRNA piR-48940, complete sequence.DQ588647 - Homo sapiens piRNA piR-55759, complete sequence.AK126297 - Homo sapiens cDNA FLJ44317 fis, clone TRACH3000586.JD063866 - Sequence 44890 from Patent EP1572962.JD066491 - Sequence 47515 from Patent EP1572962.JD140220 - Sequence 121244 from Patent EP1572962.JD413178 - Sequence 394202 from Patent EP1572962.JD479030 - Sequence 460054 from Patent EP1572962.DQ576673 - Homo sapiens piRNA piR-44785, complete sequence.DQ591043 - Homo sapiens piRNA piR-58155, complete sequence.DQ585376 - Homo sapiens piRNA piR-52488, complete sequence.DQ578372 - Homo sapiens piRNA piR-46484, complete sequence.DQ579139 - Homo sapiens piRNA piR-47251, complete sequence.JD455495 - Sequence 436519 from Patent EP1572962.JD342347 - Sequence 323371 from Patent EP1572962.JD480534 - Sequence 461558 from Patent EP1572962.JD466770 - Sequence 447794 from Patent EP1572962.JD562196 - Sequence 543220 from Patent EP1572962.JD550368 - Sequence 531392 from Patent EP1572962.JD234225 - Sequence 215249 from Patent EP1572962.JD293526 - Sequence 274550 from Patent EP1572962.JD293527 - Sequence 274551 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: ENST00000333407.1, ENST00000333407.10, ENST00000333407.2, ENST00000333407.3, ENST00000333407.4, ENST00000333407.5, ENST00000333407.6, ENST00000333407.7, ENST00000333407.8, ENST00000333407.9, FA83F_HUMAN, NM_138435, Q8NEG4, Q96FD6, uc021wqa.1, uc021wqa.2, uc021wqa.3UCSC ID: ENST00000333407.11RefSeq Accession: NM_138435
Protein: Q8NEG4
(aka FA83F_HUMAN)
CCDS: CCDS14000.2
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.