Mouse Gene Stk10 (ENSMUST00000102821.3) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Mus musculus serine/threonine kinase 10 (Stk10), transcript variant 1, mRNA. (from RefSeq NM_009288)
RefSeq Summary (NM_009288): This gene encodes a member of the Ste20 family of serine/threonine protein kinases, and is similar to several known polo-like kinase kinases. Mice deficient for this gene product are viable, but exhibit altered integrin-mediated lymphocyte adhesion characteristics. The orthologous gene product in humans can associate with and phosphorylate polo-like kinase 1, and overexpression of a kinase-dead version of the protein interferes with normal cell cycle progression. [provided by RefSeq, Jul 2008].
Gencode Transcript: ENSMUST00000102821.3
Gencode Gene: ENSMUSG00000020272.8
Transcript (Including UTRs)
   Position: mm10 chr11:32,533,305-32,624,587 Size: 91,283 Total Exon Count: 19 Strand: +
Coding Region
   Position: mm10 chr11:32,533,404-32,622,561 Size: 89,158 Coding Exon Count: 19 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDRNA Structure
Protein StructureOther SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther Names
Model InformationMethods
Data last updated at UCSC: 2019-09-19

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:32,533,305-32,624,587)mRNA (may differ from genome)Protein (966 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsMGI
PubMedReactomeSOURCEUniProtKBWikipedia

-  Comments and Description Text from UniProtKB
  ID: STK10_MOUSE
DESCRIPTION: RecName: Full=Serine/threonine-protein kinase 10; EC=2.7.11.1; AltName: Full=Lymphocyte-oriented kinase;
FUNCTION: Serine/threonine-protein kinase involved in regulation of lymphocyte migration. Phosphorylates MSN, and possibly PLK1. Involved in regulation of lymphocyte migration by mediating phosphorylation of ERM proteins such as MSN. Acts as a negative regulator of MAP3K1/MEKK1. May also act as a cell cycle regulator by acting as a polo kinase kinase: mediates phosphorylation of PLK1 in vitro; however such data require additional evidences in vivo.
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
ENZYME REGULATION: Inhibited by the pyrrole-indolinone inhibitor SU11274 (K00593): intercalates between the ATP-binding Lys-65 and alpha-C glutamate (Glu-81), resulting in a partial disordering of the lysine side chain. Also specifically inhibited by erlotinib. Slightly inhibited by gefitinib (By similarity).
SUBUNIT: Homodimer; homodimerization is required for activation segment autophosphorylation (By similarity).
SUBCELLULAR LOCATION: Cell membrane; Peripheral membrane protein (By similarity).
TISSUE SPECIFICITY: Expressed predominantly in lymphoid organs such as spleen, thymus, and bone marrow.
PTM: Autophosphorylates following homodimerization, leading to activation of the protein (By similarity).
DISRUPTION PHENOTYPE: Mice do not show any obvious abnormalities. Lymphocytes develop normally but activated lymphocytes show enhanced cell adhesion. Decreased phosphorylation of ERM proteins.
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
SIMILARITY: Contains 1 protein kinase domain.

-  Primer design for this transcript
 

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Click here to load the transcript sequence and exon structure into Primer3Plus

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To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -47.4099-0.479 Picture PostScript Text
3' UTR -686.702026-0.339 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR011009 - Kinase-like_dom
IPR022165 - PKK
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF07714 - Protein tyrosine kinase
PF12474 - Polo kinase kinase

SCOP Domains:
56112 - Protein kinase-like (PK-like)

ModBase Predicted Comparative 3D Structure on O55098
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologGenome BrowserNo ortholog
Gene Details     
Gene Sorter     
GenBankRGDEnsembl WormBase 
Protein SequenceProtein Sequence  Protein Sequence 
AlignmentAlignment  Alignment 

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity

Biological Process:
GO:0006468 protein phosphorylation
GO:0007049 cell cycle
GO:0007346 regulation of mitotic cell cycle
GO:0016310 phosphorylation
GO:0023014 signal transduction by protein phosphorylation
GO:0031098 stress-activated protein kinase signaling cascade
GO:0032147 activation of protein kinase activity
GO:0042981 regulation of apoptotic process
GO:0046777 protein autophosphorylation
GO:0071593 lymphocyte aggregation
GO:2000401 regulation of lymphocyte migration

Cellular Component:
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  D89728 - Mus musculus mRNA for LOK, complete cds.
BC096624 - Mus musculus serine/threonine kinase 10, mRNA (cDNA clone IMAGE:30430068).
BC069840 - Mus musculus serine/threonine kinase 10, mRNA (cDNA clone IMAGE:30431885), partial cds.
AK148118 - Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370024C19 product:serine/threonine kinase 10, full insert sequence.
AK220448 - Mus musculus mRNA for mKIAA4026 protein.
BC128363 - Mus musculus serine/threonine kinase 10, mRNA (cDNA clone MGC:150241 IMAGE:40111177), complete cds.
AK165126 - Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330020J07 product:hypothetical protein, full insert sequence.
AK205134 - Mus musculus cDNA, clone:Y1G0150L23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000020512, based on BLAT search.
AK186939 - Mus musculus cDNA, clone:Y0G0139E14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000020512, based on BLAT search.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein O55098 (Reactome details) participates in the following event(s):

R-MMU-6799350 Exocytosis of specific granule membrane proteins
R-MMU-6798695 Neutrophil degranulation
R-MMU-168249 Innate Immune System
R-MMU-168256 Immune System

-  Other Names for This Gene
  Alternate Gene Symbols: B1ATW8, Lok, NM_009288, O55098, STK10_MOUSE, uc007ijt.1, uc007ijt.2
UCSC ID: uc007ijt.2
RefSeq Accession: NM_009288
Protein: O55098 (aka STK10_MOUSE or STKA_MOUSE)
CCDS: CCDS24529.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.