Other Species Alignments for knownGene uc001viu.2
 
MAF table:

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Species selection:  + - default

  Primate  + -

chimp
 gorilla
 orangutan
 gibbon
 rhesus
crab-eating macaque
 baboon
 green monkey
 marmoset
 squirrel monkey
bushbaby

  Euarchontoglires  + -

chinese tree shrew
 squirrel
 lesser Egyptian jerboa
 prairie vole
 chinese hamster
golden hamster
 mouse
 rat
 naked mole-rat
 guinea pig
chinchilla
 brush-tailed rat
 rabbit
 pika

  Laurasiatheria  + -

pig
 alpaca
 bactrian camel
 dolphin
 killer whale
tibetan antelope
 cow
 sheep
 domestic goat
 horse
white rhinoceros
 cat
 dog
 ferret
panda
pacific walrus
 weddell seal
 black flying-fox
 megabat
 david's myotis (bat)
little brown bat
 big brown bat
 hedgehog
 shrew
 star-nosed mole

  Afrotheria  + -

elephant
 cape elephant shrew
 manatee
 cape golden mole
 tenrec
aardvark

  Mammal  + -

armadillo
 opossum
 tasmanian devil
 wallaby
 platypus

  Birds  + -

saker falcon
 peregrine falcon
 collared flycatcher
 white-throated sparrow
 medium ground finch
zebra finch
 tibetan ground jay
 budgerigar
 parrot
 scarlet macaw
rock pigeon
 mallard duck
 chicken
 turkey

  Sarcopterygii  + -

american alligator
 green seaturtle
 painted turtle
 chinese softshell turtle
 spiny softshell turtle
lizard
 x. tropicalis
 coelacanth

  Fish  + -

tetraodon
 fugu
 yellowbelly pufferfish
 nile tilapia
 princess of Burundi
burton's mouthbreeder
 zebra mbuna
 pundamilia nyererei
 medaka
 southern platyfish
stickleback
 atlantic cod
 zebrafish
 mexican tetra (cavefish)
 spotted gar
lamprey

For information about output data format see the User's Guide
>uc001viu.2_hg19 83 chr13:73284460-73301740-
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_panTro4 83 chr13:72584184-72601744-
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_gorGor3 83 chr13:55304892-55321808-
MASSSGAGAAAA----NLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_ponAbe2 83 chr13:74039291-74056470-
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKATENMTSZ
>uc001viu.2_nomLeu3 83 chr5:100098108-100115291-
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_rheMac3 83 chr17:53093309-53111313-
MASSSGAGGAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_macFas5 83 chr17:55088563-55106551-
MASSSGAGGAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_papHam1 83 scaffold4728:37521-55571+
MASSSGAGGAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_chlSab1 83 chr3:51842164-51860164-
MASSSGAGGAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_calJac3 83 chr1:41970400-41996326+
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_saiBol1 83 JH378147:16067256-16088801+
MASSSGAGAAGAATAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_otoGar3 83 GL873555:13402182-13426814+
MASSGGPGAAAATAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKATENMTSZ
>uc001viu.2_tupChi1 83 KB321087:2259199-2278401-
MASSGGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_speTri2 83 JH393321:8134607-8149390+
MASGSGAGSSA---AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_jacJac1 83 JH725439:45319714-45328856-
MAGGGGGAATA---AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_micOch1 83 chrUn_JH996432:6233205-6241296-
MASGSGAGAAA---SANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKGSEALKAAEN--SZ
>uc001viu.2_criGri1 83 KE377067:56484-60281+
---------------------------LLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKGTEALKAAEN--SZ
>uc001viu.2_mesAur1 83 KB708148:21135798-21146988+
MAGGGGAGAAA---SANLNAVRET---LLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKGTEALKAAEN--SZ
>uc001viu.2_mm10 83 chr14:99036490-99046063-
MASGSGPGAAA---SANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKGTEALKAAEN--SZ
>uc001viu.2_rn5 83 chr15:86943297-86953141-
MASGSGAGAAA---SANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKGTEALKAAEN--SZ
>uc001viu.2_hetGla2 83 JH602064:27815156-27831727+
MASGGGAGAAG---AANLNAVRETMDVLLEISKILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENTTSZ
>uc001viu.2_cavPor3 83 scaffold_5:48783384-48798850+
MASGSGAGAAG---AANLSAVRETMDVLLEISKILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAEN--SZ
>uc001viu.2_chiLan1 83 JH721864:33954854-33960023+
---------------------------LLEISKILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENTTSZ
>uc001viu.2_octDeg1 83 JH651528:25904959-25920387+
MASGSGGGAAG---AANLSAVRETMDVLLEISKILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEVLKAAENTTSZ
>uc001viu.2_oryCun2 83 chr8:74145648-74161946-
MASSSGSGAAG---AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKTAENMTSZ
>uc001viu.2_ochPri3 83 JH802062:30403010-30426992+
MASGSGAGAAG---AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKTADNMTSZ
>uc001viu.2_susScr3 83 chr11:49549744-49565415-
MAGNSGSG-AA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_vicPac2 83 KB632544:1351105-1362299-
MAGSSGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_camFer1 83 KB018357:742742-747798+
---------------------------LLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_turTru2 83 JH479886:74510-87832+
MASSSGAG--A--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKAAEALKAAENMTSZ
>uc001viu.2_orcOrc1 83 KB316940:846943-860179+
MASSSGAG--A--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKAAEALKAAENMTSZ
>uc001viu.2_panHod1 83 KE113944:3137657-3150635+
MASSSGAGSAA--AAANLNAVRETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_bosTau7 83 chr12:47507854-47521142-
MASSSGAGSAA--AAANLNAVRETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_oviAri3 83 chr10:47913858-47926257-
LASGSGAGSAA--AAANLNAVRETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_capHir1 83 chr12:45442490-45455446-
MASSSGAGSAA--AAANLNAVRETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_equCab2 83 chr17:46241857-46258764-
MTSSS----------------------LLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_cerSim1 83 JH767732:8747647-8764823-
MASSGGAGAAT--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTTZ
>uc001viu.2_felCat5 83 chrA1:47015994-47032371-
MASSSGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENATSZ
>uc001viu.2_canFam3 83 chr22:26864202-26880076-
MASSSGPGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENTTSZ
>uc001viu.2_musFur1 83 GL897104:1649005-1664437+
MASSSGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_ailMel1 83 GL192387.1:1406887-1424654-
MASGSGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_odoRosDiv1 83 KB229464:710380-727535-
MASSSGAGAAA----ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENTTSZ
>uc001viu.2_lepWed1 83 KB715942:510475-528386+
MASSSGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENTTSZ
>uc001viu.2_pteAle1 83 KB030714:6761524-6773031-
MASNSGAGAGA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_pteVam1 83 scaffold_153:323154-334471-
MASNSGSGAGA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_myoDav1 83 KB100095:2114742-2120417+
---------------------------LLEISRILNTGLDMETLSICVRLCEQGINPEALSAVIKELRKATDALKAAENMTSZ
>uc001viu.2_myoLuc2 83 GL429944:1579458-1592799-
MAGSSGTGAAA--ATANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSAVIKELRKATEALKASENMTSZ
>uc001viu.2_eptFus1 83 JH977635:11863538-11879946+
MASGSGTGAAA--ATANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_eriEur2 83 JH835598:170230-189282+
MASSSGPGAGA--GAANLNAVRETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_sorAra2 83 JH798156:13959328-13974866-
MASSSGAGGAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATETLKAAENITSZ
>uc001viu.2_conCri1 83 JH655887:21901133-21913439+
MASSGGAGAAA--AA-NLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_loxAfr3 83 scaffold_11:34761336-34780637+
--------------------------VLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_eleEdw1 83 JH947152:4250320-4280059+
MANSGGAGAAG-----NMNAVRETMDVLLEMSRILNTGLDMETLAICVRLCEQGINPEALASVIKELRRASDALKIAENMTSZ
>uc001viu.2_triMan1 83 JH594619:26119535-26138222+
M--SSGAGAAA-----NLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_chrAsi1 83 JH823319:15207115-15230355-
MASSSGAGAAA---AANLSAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENLTSZ
>uc001viu.2_echTel2 83 JH980344:10621297-10639174+
--------------AANLNAVRETMDILLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_oryAfe1 83 JH863930:4783678-4850402+
MASSSGAGAAA--VAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_dasNov3 83 JH569973:440303-452647+
MANSGGAGAAA--AAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_monDom5 83 chr7:131717772-131730494-
MASNTSAAAA-A--AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_sarHar1 83 chr3_GL849868_random:1651158-1670207-
MASNSGAAAA-A--VANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_macEug2 83 GL108192:40927-50374-
MASNSGAAAA-A--AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK--------
>uc001viu.2_ornAna1 83 Ultra72:177790-189518+
MASSS----AAA--ALNLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_falChe1 83 KB397848:4577915-4582711+
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_falPer1 83 KB390737:3722950-3727747+
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_ficAlb2 83 chr1:53554313-53556207+
---------------------------LFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_zonAlb1 83 KB913089:1246827-1250195-
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_geoFor1 83 JH739917:5190710-5192272+
---------------------------LFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_taeGut2 83 chr1:68388362-68391838-
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_pseHum1 83 KB221188:34741843-34745398-
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_melUnd1 83 JH556590:4056233-4061455-
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKVAENMTGZ
>uc001viu.2_amaVit1 83 KB238649:6212-9970+
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK--------
>uc001viu.2_araMac1 83 AOUJ01463531:1720-1865+
---------------------------LFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK--------
>uc001viu.2_colLiv1 83 KB375372:1903397-1909246+
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_anaPla1 83 KB743006:35943-39013+
---------------------------LFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTGZ
>uc001viu.2_galGal4 83 chr1:155461821-155465907+
MASN----------AASLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_melGal1 83 chr1:162283224-162283369+
---------------------------LFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK--------
>uc001viu.2_allMis1 83 JH739607:351837-361045+
MASN----------AANLNAVRETMDVLFEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_cheMyd1 83 KB523805:1080786-1093651-
MASC----------AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_chrPic1 83 JH584817:2109075-2128309-
MASS----------AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_pelSin1 83 JH210443:2991647-2995859-
MASS----------AANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALKAAENMTSZ
>uc001viu.2_apaSpi1 83 KB931005:595441-595586-
---------------------------LLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK--------
>uc001viu.2_anoCar2 83 chr3:88643998-88651380+
MASP----------AASLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSAVIKELRKATETLKANENMASZ
>uc001viu.2_xenTro7 83 KB021650:70941592-70945775+
PAGS---REAMA--SGSMSAVRETMDVLLEISRLLNTGLDMETLSICVRLCEQGINPEALSSVIKELRRASETLK--------
>uc001viu.2_latCha1 83 JH129385:1269-10414+
-VSSGDAGED-A--AANLNAVRETMEVLLEISRLMNTGLDMESLSICVRLCEQGINPEALSSVIKELRKATEALKTTENMTSZ
>uc001viu.2_tetNig2 83 chr17:12011835-12012133-
---SCGV-T--A-AAANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLR--------
>uc001viu.2_fr3 83 chr4:3312856-3313136+
-----------A-AAANMNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_takFla1 83 KE120496:38656-38929+
-------------AAANMNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_oreNil2 83 chrLG13:23830737-23831056+
-------------AAANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_neoBri1 83 JH422278:10612045-10612355-
---------------ANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_hapBur1 83 JH425327:4624611-4624933+
---------------ANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_mayZeb1 83 JH720521:2287232-2287377-
---------------------------LLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_punNye1 83 JH419229:3171541-3171851-
---------------ANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_oryLat2 83 chr15:17970039-17970184-
---------------------------LLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASESLK--------
>uc001viu.2_xipMac1 83 JH557088:135057-135202-
---------------------------LLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASETLK--------
>uc001viu.2_gasAcu1 83 chrVI:11960261-11960406+
---------------------------LLEISRLLNTGLDMESLSICVRLCEQGINPEALSAVIKELRKASETLK--------
>uc001viu.2_gadMor1 83 HE571397:505415-506149+
--------A--A-GAANMTAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSLVIKELRKASDSLK--------
>uc001viu.2_danRer7 83 chr1:29776454-29779303-
--------------AANMNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSSVIKELRRASDSLK--------
>uc001viu.2_lepOcu1 83 chrLG17:32119995-32121386-
--------------AANLNAVRETMDVLLEISRLLNTGLDMESLSICVRLCEQGINPEALSSVIKELRKASDALK--------