Schema for INSDC - Accession at INSDC - International Nucleotide Sequence Database Collaboration
  Database: mm10    Primary Table: ucscToINSDC    Row Count: 66   Data last updated: 2016-04-11
Format description: UCSC to INSDC chromosome name translation table.
fieldexampleSQL type info description
chrom chr1varchar(255) values UCSC chromosome name
chromStart 0int(10) unsigned range Start position in chromosome
chromEnd 195471971int(10) unsigned range End position in chromosome
name CM000994.2varchar(255) values INSDC name at www.insdc.org

Connected Tables and Joining Fields
        mm10.chromInfo.chrom (via ucscToINSDC.chrom)

Sample Rows
 
chromchromStartchromEndname
chr10195471971CM000994.2
chr100130694993CM001003.2
chr110122082543CM001004.2
chr120120129022CM001005.2
chr130120421639CM001006.2
chr140124902244CM001007.2
chr150104043685CM001008.2
chr16098207768CM001009.2
chr17094987271CM001010.2
chr18090702639CM001011.2

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

INSDC (ucscToINSDC) Track Description
 

Description

This track associates UCSC Genome Browser chromosome names to accession names from the International Nucleotide Sequence Database Collaboration (INSDC).

The data were downloaded from the NCBI assembly database.

Credits

The data for this track was prepared by Hiram Clawson.