ENCODE RNA-seq Track Settings
 
ENCODE Long RNA-seq and Short RNA-seq Contigs and Signal

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Select view (help):
Contigs ▾       Signal ▾      
Select subtracks by localization and cell line:
 All Localization Chromatin  Cytosol  Nucleolus  Nucleoplasm  Nucleus  Polysome  Whole Cell 
Cell Line
GM12878 
H1-hESC 
K562 
HeLa-S3 
HepG2 
HUVEC 
A549 
AG04450 
BJ 
HMEC 
HSMM 
MCF-7 
NHEK 
NHLF 
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SK-N-SH RA 
Select subtracks further by: (select multiple categories and items - help)
Tier:
rnaLength:
rnaExtract:
Strand:
protocol:
Replicate:

List subtracks: only selected/visible    all    ()
  view↓1 Tier↓2 Cell Line↓3 Localization↓4 rnaExtract↓5 rnaLength↓6 Strand↑7 protocol↓8 Replicate↓9   Track Name↓10  
 
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 Contigs  1  GM12878  Whole Cell  non-PolyA  Long  Plus      0  GM12878 Whole Cell non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Whole Cell  PolyA  Long  Plus      0  GM12878 Whole Cell PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Whole Cell  None  Short  Plus      0  GM12878 Whole Cell Short RNA CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Cytosol  non-PolyA  Long  Plus      0  GM12878 Cytosol non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Cytosol  PolyA  Long  Plus      0  GM12878 Cytosol PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Cytosol  None  Short  Plus      0  GM12878 Cytosol Short RNA CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Nucleus  non-PolyA  Long  Plus      0  GM12878 Nucleus non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Nucleus  PolyA  Long  Plus      0  GM12878 Nucleus PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  GM12878  Nucleus  None  Short  Plus      0  GM12878 Nucleus Short RNA CSHL Contigs    schema 
 
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 Contigs  1  K562  Whole Cell  non-PolyA  Long  Plus      0  K562 Whole Cell non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Whole Cell  PolyA  Long  Plus      0  K562 Whole Cell PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Whole Cell  None  Short  Plus      0  K562 Whole Cell Short RNA CSHL Contigs    schema 
 
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 Contigs  1  K562  Chromatin  Total  Long  Plus      0  K562 Chromatin Total Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Chromatin  None  Short  Plus      0  K562 Chromatin Short RNA CSHL Contigs    schema 
 
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 Contigs  1  K562  Cytosol  non-PolyA  Long  Plus      0  K562 Cytosol non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Cytosol  PolyA  Long  Plus      0  K562 Cytosol PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Cytosol  None  Short  Plus      0  K562 Cytosol Short RNA CSHL Contigs    schema 
 
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 Contigs  1  K562  Nucleus  non-PolyA  Long  Plus      0  K562 Nucleus non-PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Nucleus  PolyA  Long  Plus      0  K562 Nucleus PolyA Long CSHL Contigs    schema 
 
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 Contigs  1  K562  Nucleus  None  Short  Plus      0  K562 Nucleus Short RNA CSHL Contigs    schema