Caltech RNA-seq Track Settings
 
ENCODE Caltech RNA-seq   (All Expression tracks)

Maximum display mode:       Reset to defaults   
Select views (Help):
Plus Raw Signal ▾       Minus Raw Signal ▾       Raw Signal ▾       Splice Sites ▾       Alignments ▾      
Select subtracks by read type and cell line:

  Replicate: 1 2 3 4
 All Read Type Single 32nt
(1x32)
 
 Single Strand-Specific 75nt
(1x75D)
 
 Paired 75nt
(2x75)
 
Cell Line
GM12878 (Tier 1) 
H1-hESC (Tier 1) 
K562 (Tier 1) 
HeLa-S3 (Tier 2) 
HepG2 (Tier 2) 
HUVEC (Tier 2) 
NHEK 
List subtracks: only selected/visible    all    ()
  Cell Line↓1 Read Type↓2 Replicate↓3 views↓4   Track Name↓5    Restricted Until↓6
 
hide
 Configure
 GM12878  Single 32nt (1x32)  1  Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x32 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Single 32nt (1x32)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x32 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Single 32nt (1x32)  2  Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x32 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Single 32nt (1x32)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x32 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  1  Minus Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x75 Stranded Minus Raw Signal    Schema   2010-10-04 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  1  Plus Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x75 Stranded Plus Raw Signal    Schema   2010-10-04 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x75 BLAT Stranded Splice Aligns    Schema   2010-10-04 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 1x75 Stranded Splice Aligns    Schema   2010-10-04 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  2  Minus Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x75 Stranded Minus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  2  Plus Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x75 Stranded Plus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x75 BLAT Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 GM12878  Single Strand-Specific 75nt (1x75D)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 1x75 Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  1  Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 2x75 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 2x75 BLAT Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 1 2x75 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  2  Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 400bp 2x75 Raw Signal    Schema   2010-10-14 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  2  Raw Signal  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 2x75 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 400bp 2x75 Splice Aligns    Schema   2010-10-14 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 2x75 BLAT Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 GM12878  Paired 75nt (2x75)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ GM12878 Rep 2 2x75 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Single 32nt (1x32)  1  Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x32 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 K562  Single 32nt (1x32)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x32 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Single 32nt (1x32)  2  Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x32 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 K562  Single 32nt (1x32)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x32 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  1  Minus Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x75 Stranded Minus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  1  Plus Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x75 Stranded Plus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x75 BLAT Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 1x75 Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  2  Minus Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x75 Stranded Minus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  2  Plus Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x75 Stranded Plus Raw Signal    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x75 BLAT Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 K562  Single Strand-Specific 75nt (1x75D)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 1x75 Stranded Splice Aligns    Schema   2010-10-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  1  Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 2x75 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 2x75 BLAT Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  1  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 1 2x75 Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  2  Raw Signal  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 2x75 Raw Signal    Schema   2009-12-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 2x75 BLAT Splice Aligns    Schema   2009-12-06 
 
hide
 Configure
 K562  Paired 75nt (2x75)  2  Splice Sites  ENCODE Caltech RNA-seq PolyA+ K562 Rep 2 2x75 Splice Aligns    Schema   2009-12-06