Description
This track shows DNase I Footprint data from
FlyReg
version 2.0. FlyReg provides access to results of the systematic curation and
genome annotation of 1,350 DNase I footprints for the fruitfly
D. melanogaster reported in
Bergman, C.M. et al. (see below).
When available, a footprint motif is also displayed,
based on a MEME
matrix
computed by Dan Pollard on the set of footprints for this factor.
Credits
Thanks to
Casey Bergman
for providing the FlyReg data. If used in published work, please cite
Bergman CM, Carlson JW, Celniker SE.
Drosophila DNase I footprint database: a systematic genome annotation of transcription factor
binding sites in the fruitfly, Drosophila melanogaster.
Bioinformatics. 2005 Apr 15;21(8):1747-9.
PMID: 15572468
Thanks to
Dan Pollard
for providing the footprint motif matrices.
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