Description
This track shows Genoscope gene model annotations from the
GAZE program written by
Kevin Howe. These annotations were computed using GAZE with a custom designed gene model. GAZE
integrates information from Geneid, Genscan, Exofish (Human, Mouse and Fugu), Genewise (Human and
Mouse) and Tetraodon cDNAs.
Methods
For a description of the GAZE program and the model that underlies it, refer
to:
Howe KL, Chothia T, Durbin R.
GAZE: a generic framework for the integration of gene-prediction data by dynamic programming.
Genome Res. 2002 Sep;12(9):1418-27.
PMID: 12213779; PMC: PMC186661
GAZE was run on masked Tetraodon genomic DNA using parameters calibrated for
the Tetraodon genome.
Credits
Thanks to
Genoscope for providing these data.
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