Description
This track represents coverage of clones that were assayed for
segmental duplications using high-depth sequence reads from the
Whole Genome Shotgun assembly of Platypus.
Regions absent from this track were not assessed by this version of
the Segmental Duplication Database (SDD).
For a description of the whole-genome shotgun sequence detection (WSSD)
method, see Bailey, et al., 2002, in
the References section below.
Credits
The data were provided by
Ginger Cheng
and Evan Eichler.
References
Bailey JA, Gu Z, Clark RA, Reinert K, Samonte RV, Schwartz S, Adams MD, Myers EW, Li PW, Eichler EE.
Recent segmental duplications in the human genome.
Science. 2002 Aug 9;297(5583):1003-7.
PMID: 12169732
Bailey JA, Yavor AM, Massa HF, Trask BJ, Eichler EE.
Segmental duplications: organization and impact within the current human genome project
assembly.
Genome Res. 2001 Jun;11(6):1005-17.
PMID: 11381028; PMC: PMC311093
She X, Jiang Z, Clark RA, Liu G, Cheng Z, Tuzun E, Church DM, Sutton G, Halpern AL, Eichler EE.
Shotgun sequence assembly and recent segmental duplications within the human genome.
Nature. 2004 Oct 21;431(7011):927-30.
PMID: 15496912
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