Description

This track shows protein sequences displayed by virus-infected cells to T-cells as annotated by the National Institute for Allergy and Infectious Diseases (NIAID) Immune Epitope Database (IEDB). Only sequences with a positive assay outcome are shown on the track. All fields annotated by IEDB and exported in their "compact" file are shown on the details page, which also provides links back to the IEDB.

See also the detailed explanation of the curated Ebola data in the IEDB Knowledgebase.

To enrich for MHC Class II epitopes, this track shows epitopes with annotated Class II alleles or, if the allele was not annotated, alleles with more than 12 amino acids.

Display Conventions

Matching peptide sequences are shown. Mouse over the features to see the exact MHC allele, if annotated.

References

Vita R, Zarebski L, Greenbaum JA, Emami H, Hoof I, Salimi N, Damle R, Sette A, Peters B. The immune epitope database 2.0. Nucleic Acids Res. 2010 Jan;38(Database issue):D854-62. PMID: 19906713; PMC: PMC2808938