RIKEN CAGE Loc Track Settings
 
RNA Subcellular CAGE Localization from ENCODE/RIKEN   (All Expression tracks)

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Cell Line
GM12878 (Tier 1) 
H1-hESC (Tier 1) 
K562 (Tier 1) 
A549 (Tier 2) 
B cells CD20+ (Tier 2) 
HeLa-S3 (Tier 2) 
HepG2 (Tier 2) 
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IMR90 (Tier 2) 
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Monocytes CD14+ (Tier 2) 
SK-N-SH (Tier 2) 
AG04450 
BJ 
CD34+ Mobilized 
HAoAF 
HAoEC 
HCH 
HFDPC 
HMEpC 
hMSC-AT 
hMSC-BM 
hMSC-UC 
HOB 
HPC-PL 
HPIEpC 
HSaVEC 
HVMF 
HWP 
NHDF 
NHEK 
NHEM.f M2 
NHEM M2 
Prostate 
SkMC 
SK-N-SH RA 
Cell Line
 All Localization Whole Cell  Cytosol  Nucleus  Polysome  Nucleoplasm  Chromatin  Nucleolus 
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  Cell Line↓1 Localization↓2 RNA Extract↓3 views↑4 Replicate↓5   Track Name↓6    Restricted Until↓7
 
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 K562  Cytosol  PolyA-  TSS HMM Clusters  Pooled  K562 cytosol polyA- CAGE TSS HMM from ENCODE/RIKEN    schema   2012-11-10 
 
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 K562  Cytosol  PolyA-  Plus Signal  1st  K562 cytosol polyA- CAGE Plus start sites Rep 1 from ENCODE/RIKEN    schema   2009-09-09 
 
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 K562  Cytosol  PolyA-  Minus Signal  1st  K562 cytosol polyA- CAGE Minus start sites Rep 1 from ENCODE/RIKEN    schema   2009-09-09 
 
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 K562  Cytosol  PolyA+  TSS HMM Clusters  Pooled  K562 cytosol polyA+ CAGE TSS HMM from ENCODE/RIKEN    schema   2012-11-10 
 
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 K562  Cytosol  PolyA+  Plus Signal  1st  K562 cytosol polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21 
 
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 K562  Cytosol  PolyA+  Minus Signal  1st  K562 cytosol polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21 
 
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 K562  Nucleus  PolyA-  TSS HMM Clusters  Pooled  K562 nucleus polyA- CAGE TSS HMM from ENCODE/RIKEN    schema   2012-11-10 
 
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 K562  Nucleus  PolyA-  Plus Signal  1st  K562 nucleus polyA- CAGE Plus start sites Rep 1 from ENCODE/RIKEN    schema   2009-09-09 
 
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 K562  Nucleus  PolyA-  Minus Signal  1st  K562 nucleus polyA- CAGE Minus start sites Rep 1 from ENCODE/RIKEN    schema   2009-09-09 
 
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 K562  Nucleus  PolyA+  TSS HMM Clusters  Pooled  K562 nucleus polyA+ CAGE TSS HMM from ENCODE/RIKEN    schema   2012-11-10 
 
hide
 K562  Nucleus  PolyA+  Plus Signal  1st  K562 nucleus polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21 
 
hide
 K562  Nucleus  PolyA+  Minus Signal  1st  K562 nucleus polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21 
 
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 K562  Whole Cell  PolyA+  TSS HMM Clusters  Pooled  K562 whole cell polyA+ CAGE TSS HMM from ENCODE/RIKEN    schema   2012-11-10 
 
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 K562  Whole Cell  PolyA+  Plus Signal  1st  K562 whole cell polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21 
 
hide
 K562  Whole Cell  PolyA+  Minus Signal  1st  K562 whole cell polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN    schema   2011-06-21