UCSC Genome Browser on CHM13 Homo sapiens T2T CHM13 (v1.1) (t2t-chm13-v1.1)
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chr1:120,999,228-128,957,276 7,958,049 bp.
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-   Custom
Hela_G1_macs2_peaks
Hela_G2_macs_peaks
-   T2T CHM13 Dev
Cactus
CAT Genes + LiftOff V4
RepeatMasker
Cactus (simplified)
CenSat Annotation
Simple Repeats
Composite Repeats
New Satellites
Validation
CpG Islands
SEDEF Segmental Dups
GENCODE BLAT
ASat HOR
ASat SF
ASat strand
ASat StV
ASat shared HORs
GRCh38 LASTZ
PROseq_bt2-default_kmerFilt
PROseq_bt2-k100_kmerFilt
RNAseq default
GRCh38 Synteny
GRCH38 non-syntenic
cytoBandIdeo
GC Percent
LiftOff Genes
-   Mapping and Assembly
Base Position
Validation
GC Percent
Restr Enzymes
Short Match
-   Centromeres and Telomeres
CenSat Annotation
New Satellites
ASat HOR
ASat SF
ASat strand
ASat StV
ASat shared HORs
-   Genes
CAT Genes + LiftOff V4
GENCODE BLAT
LiftOff Genes
-   Transcription
PROseq_bt2-default_kmerFilt
PROseq_bt2-k100_kmerFilt
RNAseq default
-   Regulation
CpG Islands
-   Comparative Genomics
Cactus
Cactus (simplified)
GRCh38 LASTZ
GRCh38 Synteny
GRCH38 non-syntenic
-   Variation
RepeatMasker
Simple Repeats
Composite Repeats
SEDEF Segmental Dups
+   Experimental
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