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UCSC Genes

CDK5RAP3 (uc002imr.1) at chr17:43403428-43414146 - CDK5 regulatory subunit associated protein 3

ENCODE Gencode Manual Gene Annotations (level 1+2) (Oct 2009)

IGKC at chr2:88911815-88942550
IGKC at chr2:88937789-88938311
IGKC at chr2:88937824-88946768
IGKC at chr2:89197948-89198450
IGKC at chr2:89776383-89776885

ENCODE Gencode Automated Gene Annotations (level 3) (Oct 2009)

IGKC at chr2:88937790-89091095
IGKC at chr2:88937794-89349347
IGKC at chr2:88937794-89013011
IGKC at chr2:88937794-89013011
IGKC at chr2:88937795-89400997
IGKC at chr2:88937795-89326184
IGKC at chr2:88937795-89303045
IGKC at chr2:88937795-89166334
IGKC at chr2:88937795-89121327
IGKC at chr2:88937797-89303057

AJ294735 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
  319   99.4%          2     -  88937991  88938309  AJ294735     1   319   321

Non-Human Aligned mRNA Search Results

HE653115 - Camelus dromedarius partial mRNA for immunoglobulin kappa light chain (IGKC gene), isolate L10C.
AJ294736 - Mus musculus partial mRNA for immunoglobulin light chain constant region kappa IGKC gene).
DQ402471 - Rattus norvegicus immunoglobulin kappa constant region (Igkc) mRNA, partial cds.

Ensembl Genes

IGKC at chr2:89776410-89776887 - (ENST00000390273)
IGKC at chr2:89120834-89121310 - (ENST00000390251)
IGKC at chr2:89073041-89073512 - (ENST00000390248)
IGKC at chr2:88937989-88938311 - (ENST00000390237)
IGKC at chr2:89046894-89047372 - (ENST00000390246)
IGKC at chr2:89090592-89091069 - (ENST00000390249)
IGKC at chr2:89197946-89198423 - (ENST00000390254)
IGKC at chr2:89836021-89836497 - (ENST00000390276)

Vega Protein-Coding Annotations

OTTHUMT00000323482 at chr2:88937789-88938311